Protein–RNA interactions for Protein: P20334

Tnfrsf9, Tumor necrosis factor receptor superfamily member 9, mousemouse

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf9P20334 Nrn1-204ENSMUST00000224323 1779 ntBASIC12.11□□□□□ -0.47
Tnfrsf9P20334 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC12.11□□□□□ -0.47
Tnfrsf9P20334 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tnfrsf9P20334 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC12.11□□□□□ -0.47
Tnfrsf9P20334 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC12.11□□□□□ -0.47
Tnfrsf9P20334 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC12.11□□□□□ -0.47
Tnfrsf9P20334 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tnfrsf9P20334 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC12.11□□□□□ -0.47
Tnfrsf9P20334 AC151836.1-202ENSMUST00000226259 753 ntBASIC12.11□□□□□ -0.47
Tnfrsf9P20334 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tnfrsf9P20334 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tnfrsf9P20334 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Tnfrsf9P20334 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tnfrsf9P20334 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Tnfrsf9P20334 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Tnfrsf9P20334 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
Tnfrsf9P20334 AC153526.5-201ENSMUST00000218661 2147 ntBASIC12.11□□□□□ -0.47
Tnfrsf9P20334 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tnfrsf9P20334 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC12.11□□□□□ -0.47
Tnfrsf9P20334 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC12.11□□□□□ -0.47
Tnfrsf9P20334 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tnfrsf9P20334 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tnfrsf9P20334 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Tnfrsf9P20334 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Tnfrsf9P20334 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tnfrsf9P20334 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Tnfrsf9P20334 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tnfrsf9P20334 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tnfrsf9P20334 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tnfrsf9P20334 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tnfrsf9P20334 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Tnfrsf9P20334 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tnfrsf9P20334 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tnfrsf9P20334 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tnfrsf9P20334 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tnfrsf9P20334 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Tnfrsf9P20334 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC12.1□□□□□ -0.47
Tnfrsf9P20334 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tnfrsf9P20334 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tnfrsf9P20334 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Tnfrsf9P20334 Gm15427-201ENSMUST00000117288 531 ntBASIC12.1□□□□□ -0.47
Tnfrsf9P20334 Gm6226-201ENSMUST00000117765 1146 ntBASIC12.1□□□□□ -0.47
Tnfrsf9P20334 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC12.1□□□□□ -0.47
Tnfrsf9P20334 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC12.1□□□□□ -0.47
Tnfrsf9P20334 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Tnfrsf9P20334 Gm43474-201ENSMUST00000196415 774 ntBASIC12.1□□□□□ -0.47
Tnfrsf9P20334 Gm9682-201ENSMUST00000197505 556 ntBASIC12.1□□□□□ -0.47
Tnfrsf9P20334 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Tnfrsf9P20334 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tnfrsf9P20334 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC12.1□□□□□ -0.47
Tnfrsf9P20334 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Tnfrsf9P20334 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Tnfrsf9P20334 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tnfrsf9P20334 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Tnfrsf9P20334 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tnfrsf9P20334 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tnfrsf9P20334 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tnfrsf9P20334 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC12.1□□□□□ -0.47
Tnfrsf9P20334 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tnfrsf9P20334 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tnfrsf9P20334 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tnfrsf9P20334 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Tnfrsf9P20334 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC12.1□□□□□ -0.47
Tnfrsf9P20334 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tnfrsf9P20334 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC12.1□□□□□ -0.47
Tnfrsf9P20334 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tnfrsf9P20334 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tnfrsf9P20334 App-207ENSMUST00000227737 2827 ntBASIC12.1□□□□□ -0.47
Tnfrsf9P20334 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC12.1□□□□□ -0.47
Tnfrsf9P20334 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tnfrsf9P20334 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Tnfrsf9P20334 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tnfrsf9P20334 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tnfrsf9P20334 Gm43352-201ENSMUST00000196419 3065 ntBASIC12.09□□□□□ -0.47
Tnfrsf9P20334 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tnfrsf9P20334 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tnfrsf9P20334 Ntrk2-205ENSMUST00000224402 2284 ntBASIC12.09□□□□□ -0.47
Tnfrsf9P20334 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tnfrsf9P20334 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Tnfrsf9P20334 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Tnfrsf9P20334 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Tnfrsf9P20334 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tnfrsf9P20334 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tnfrsf9P20334 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Tnfrsf9P20334 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tnfrsf9P20334 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tnfrsf9P20334 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tnfrsf9P20334 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tnfrsf9P20334 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tnfrsf9P20334 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tnfrsf9P20334 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
Tnfrsf9P20334 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tnfrsf9P20334 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Tnfrsf9P20334 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC12.09□□□□□ -0.47
Tnfrsf9P20334 Gm45609-204ENSMUST00000209837 1207 ntTSL 5 BASIC12.09□□□□□ -0.47
Tnfrsf9P20334 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC12.09□□□□□ -0.47
Tnfrsf9P20334 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tnfrsf9P20334 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tnfrsf9P20334 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tnfrsf9P20334 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms