Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ccl3P10855 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ccl3P10855 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ccl3P10855 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ccl3P10855 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccl3P10855 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ccl3P10855 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC12.98□□□□□ -0.33
Ccl3P10855 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccl3P10855 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Ccl3P10855 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccl3P10855 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccl3P10855 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccl3P10855 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ccl3P10855 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccl3P10855 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccl3P10855 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccl3P10855 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ccl3P10855 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ccl3P10855 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC12.98□□□□□ -0.33
Ccl3P10855 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccl3P10855 Gm12138-201ENSMUST00000122180 951 ntBASIC12.98□□□□□ -0.33
Ccl3P10855 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ccl3P10855 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC12.98□□□□□ -0.33
Ccl3P10855 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
Ccl3P10855 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC12.98□□□□□ -0.33
Ccl3P10855 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ccl3P10855 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccl3P10855 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC12.98□□□□□ -0.33
Ccl3P10855 Gm45384-201ENSMUST00000210451 277 ntBASIC12.98□□□□□ -0.33
Ccl3P10855 Gm9908-201ENSMUST00000211534 448 ntBASIC12.98□□□□□ -0.33
Ccl3P10855 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC12.98□□□□□ -0.33
Ccl3P10855 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccl3P10855 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Ccl3P10855 Mir125a-201ENSMUST00000083545 68 ntBASIC12.98□□□□□ -0.33
Ccl3P10855 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccl3P10855 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccl3P10855 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccl3P10855 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC12.98□□□□□ -0.33
Ccl3P10855 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
Ccl3P10855 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccl3P10855 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Ccl3P10855 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccl3P10855 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccl3P10855 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Ccl3P10855 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccl3P10855 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ccl3P10855 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ccl3P10855 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ccl3P10855 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ccl3P10855 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC12.97□□□□□ -0.33
Ccl3P10855 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ccl3P10855 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ccl3P10855 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ccl3P10855 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Ccl3P10855 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ccl3P10855 Gm15222-202ENSMUST00000228667 1726 ntBASIC12.97□□□□□ -0.33
Ccl3P10855 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ccl3P10855 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ccl3P10855 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ccl3P10855 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ccl3P10855 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Ccl3P10855 Gm11478-201ENSMUST00000117851 599 ntBASIC12.97□□□□□ -0.33
Ccl3P10855 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC12.97□□□□□ -0.33
Ccl3P10855 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ccl3P10855 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ccl3P10855 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC12.97□□□□□ -0.33
Ccl3P10855 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC12.97□□□□□ -0.33
Ccl3P10855 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC12.97□□□□□ -0.33
Ccl3P10855 Gm9726-201ENSMUST00000180321 678 ntBASIC12.97□□□□□ -0.33
Ccl3P10855 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC12.97□□□□□ -0.33
Ccl3P10855 Gm45059-201ENSMUST00000205558 1077 ntBASIC12.97□□□□□ -0.33
Ccl3P10855 AC156016.3-201ENSMUST00000228623 344 ntBASIC12.97□□□□□ -0.33
Ccl3P10855 Gm15823-201ENSMUST00000064305 670 ntBASIC12.97□□□□□ -0.33
Ccl3P10855 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Ccl3P10855 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Ccl3P10855 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ccl3P10855 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ccl3P10855 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ccl3P10855 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ccl3P10855 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ccl3P10855 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ccl3P10855 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ccl3P10855 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ccl3P10855 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ccl3P10855 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ccl3P10855 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ccl3P10855 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ccl3P10855 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ccl3P10855 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ccl3P10855 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ccl3P10855 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ccl3P10855 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ccl3P10855 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ccl3P10855 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ccl3P10855 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ccl3P10855 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ccl3P10855 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ccl3P10855 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ccl3P10855 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Ccl3P10855 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms