Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
CopeO89079 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
CopeO89079 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC15.25■□□□□ 0.03
CopeO89079 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CopeO89079 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CopeO89079 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CopeO89079 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CopeO89079 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CopeO89079 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CopeO89079 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CopeO89079 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CopeO89079 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CopeO89079 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CopeO89079 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CopeO89079 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC15.24■□□□□ 0.03
CopeO89079 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CopeO89079 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CopeO89079 Gm5184-201ENSMUST00000220417 1702 ntBASIC15.24■□□□□ 0.03
CopeO89079 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CopeO89079 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
CopeO89079 Gm11780-201ENSMUST00000136880 516 ntBASIC15.24■□□□□ 0.03
CopeO89079 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CopeO89079 Gm2308-201ENSMUST00000166539 1004 ntBASIC15.24■□□□□ 0.03
CopeO89079 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CopeO89079 Gm33142-201ENSMUST00000193913 867 ntBASIC15.24■□□□□ 0.03
CopeO89079 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC15.24■□□□□ 0.03
CopeO89079 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC15.24■□□□□ 0.03
CopeO89079 AC151836.1-202ENSMUST00000226259 753 ntBASIC15.24■□□□□ 0.03
CopeO89079 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CopeO89079 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CopeO89079 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC15.24■□□□□ 0.03
CopeO89079 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CopeO89079 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CopeO89079 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
CopeO89079 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
CopeO89079 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
CopeO89079 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC15.24■□□□□ 0.03
CopeO89079 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CopeO89079 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
CopeO89079 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
CopeO89079 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CopeO89079 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CopeO89079 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
CopeO89079 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CopeO89079 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CopeO89079 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC15.23■□□□□ 0.03
CopeO89079 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC15.23■□□□□ 0.03
CopeO89079 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CopeO89079 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
CopeO89079 Gm13836-201ENSMUST00000121159 501 ntBASIC15.23■□□□□ 0.03
CopeO89079 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
CopeO89079 Gm13830-205ENSMUST00000201195 1155 ntBASIC15.23■□□□□ 0.03
CopeO89079 AC160338.1-201ENSMUST00000214232 705 ntBASIC15.23■□□□□ 0.03
CopeO89079 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CopeO89079 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CopeO89079 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
CopeO89079 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CopeO89079 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
CopeO89079 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CopeO89079 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC15.23■□□□□ 0.03
CopeO89079 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
CopeO89079 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CopeO89079 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CopeO89079 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CopeO89079 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CopeO89079 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CopeO89079 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CopeO89079 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CopeO89079 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CopeO89079 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CopeO89079 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC15.22■□□□□ 0.03
CopeO89079 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CopeO89079 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CopeO89079 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CopeO89079 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CopeO89079 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CopeO89079 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC15.22■□□□□ 0.03
CopeO89079 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CopeO89079 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
CopeO89079 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
CopeO89079 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
CopeO89079 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
CopeO89079 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CopeO89079 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC15.22■□□□□ 0.03
CopeO89079 Gm4535-201ENSMUST00000182274 558 ntBASIC15.22■□□□□ 0.03
CopeO89079 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
CopeO89079 AC164567.1-201ENSMUST00000219185 960 ntBASIC15.22■□□□□ 0.03
CopeO89079 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CopeO89079 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CopeO89079 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CopeO89079 Gm10355-201ENSMUST00000097146 517 ntBASIC15.22■□□□□ 0.03
CopeO89079 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CopeO89079 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CopeO89079 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CopeO89079 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
CopeO89079 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
CopeO89079 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CopeO89079 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CopeO89079 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CopeO89079 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC15.22■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms