Protein–RNA interactions for Protein: O35451

Atf6b, Cyclic AMP-dependent transcription factor ATF-6 beta, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6bO35451 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Atf6bO35451 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Atf6bO35451 Gm43697-201ENSMUST00000199637 2581 ntBASIC12.84□□□□□ -0.35
Atf6bO35451 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC12.84□□□□□ -0.35
Atf6bO35451 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Atf6bO35451 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Atf6bO35451 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Atf6bO35451 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC12.84□□□□□ -0.35
Atf6bO35451 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Atf6bO35451 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Atf6bO35451 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Atf6bO35451 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Atf6bO35451 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Atf6bO35451 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Atf6bO35451 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Atf6bO35451 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.36
Atf6bO35451 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Atf6bO35451 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Atf6bO35451 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Atf6bO35451 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Atf6bO35451 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Atf6bO35451 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Atf6bO35451 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Atf6bO35451 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC12.83□□□□□ -0.36
Atf6bO35451 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Atf6bO35451 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Atf6bO35451 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Atf6bO35451 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Atf6bO35451 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Atf6bO35451 Mir8117-201ENSMUST00000184773 107 ntBASIC12.83□□□□□ -0.36
Atf6bO35451 Mir7036b-201ENSMUST00000184791 63 ntBASIC12.83□□□□□ -0.36
Atf6bO35451 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC12.83□□□□□ -0.36
Atf6bO35451 Gm44945-201ENSMUST00000206764 1187 ntBASIC12.83□□□□□ -0.36
Atf6bO35451 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC12.83□□□□□ -0.36
Atf6bO35451 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Atf6bO35451 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
Atf6bO35451 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Atf6bO35451 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Atf6bO35451 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Atf6bO35451 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Atf6bO35451 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Atf6bO35451 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Atf6bO35451 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Atf6bO35451 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Atf6bO35451 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Atf6bO35451 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Atf6bO35451 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
Atf6bO35451 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Atf6bO35451 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Atf6bO35451 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Atf6bO35451 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.36
Atf6bO35451 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Atf6bO35451 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
Atf6bO35451 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC12.82□□□□□ -0.36
Atf6bO35451 Pcgf5-211ENSMUST00000225920 6443 ntBASIC12.82□□□□□ -0.36
Atf6bO35451 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Atf6bO35451 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Atf6bO35451 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Atf6bO35451 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC12.82□□□□□ -0.36
Atf6bO35451 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Atf6bO35451 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Atf6bO35451 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Atf6bO35451 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Atf6bO35451 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Atf6bO35451 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Atf6bO35451 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Atf6bO35451 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC12.82□□□□□ -0.36
Atf6bO35451 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Atf6bO35451 Mir3113-201ENSMUST00000175478 76 ntBASIC12.82□□□□□ -0.36
Atf6bO35451 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Atf6bO35451 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Atf6bO35451 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Atf6bO35451 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Atf6bO35451 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Atf6bO35451 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Atf6bO35451 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC12.82□□□□□ -0.36
Atf6bO35451 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Atf6bO35451 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Atf6bO35451 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Atf6bO35451 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Atf6bO35451 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Atf6bO35451 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Atf6bO35451 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Atf6bO35451 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Atf6bO35451 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Atf6bO35451 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Atf6bO35451 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Atf6bO35451 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Atf6bO35451 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Atf6bO35451 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Atf6bO35451 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Atf6bO35451 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
Atf6bO35451 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Atf6bO35451 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Atf6bO35451 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Atf6bO35451 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Atf6bO35451 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC12.81□□□□□ -0.36
Atf6bO35451 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Atf6bO35451 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Atf6bO35451 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms