Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC26.54■■□□□ 1.84
Ccdc180J3QNE4 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC26.54■■□□□ 1.84
Ccdc180J3QNE4 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC26.54■■□□□ 1.84
Ccdc180J3QNE4 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
Ccdc180J3QNE4 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
Ccdc180J3QNE4 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Ccdc180J3QNE4 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC26.54■■□□□ 1.84
Ccdc180J3QNE4 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC26.54■■□□□ 1.84
Ccdc180J3QNE4 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC26.54■■□□□ 1.84
Ccdc180J3QNE4 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC26.54■■□□□ 1.84
Ccdc180J3QNE4 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Ccdc180J3QNE4 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Ccdc180J3QNE4 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC26.54■■□□□ 1.84
Ccdc180J3QNE4 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC26.54■■□□□ 1.84
Ccdc180J3QNE4 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Ccdc180J3QNE4 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC26.54■■□□□ 1.84
Ccdc180J3QNE4 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Ccdc180J3QNE4 AC153962.4-201ENSMUST00000217878 242 ntBASIC26.54■■□□□ 1.84
Ccdc180J3QNE4 Gm9899-201ENSMUST00000065519 555 ntBASIC26.54■■□□□ 1.84
Ccdc180J3QNE4 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Ccdc180J3QNE4 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC26.53■■□□□ 1.84
Ccdc180J3QNE4 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Ccdc180J3QNE4 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC26.53■■□□□ 1.84
Ccdc180J3QNE4 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Ccdc180J3QNE4 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Ccdc180J3QNE4 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Ccdc180J3QNE4 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC26.53■■□□□ 1.84
Ccdc180J3QNE4 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC26.53■■□□□ 1.84
Ccdc180J3QNE4 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC26.53■■□□□ 1.84
Ccdc180J3QNE4 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
Ccdc180J3QNE4 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC26.53■■□□□ 1.84
Ccdc180J3QNE4 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
Ccdc180J3QNE4 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC26.53■■□□□ 1.84
Ccdc180J3QNE4 Gm44608-201ENSMUST00000206827 855 ntBASIC26.53■■□□□ 1.84
Ccdc180J3QNE4 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC26.53■■□□□ 1.84
Ccdc180J3QNE4 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Ccdc180J3QNE4 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC26.52■■□□□ 1.84
Ccdc180J3QNE4 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC26.52■■□□□ 1.84
Ccdc180J3QNE4 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Ccdc180J3QNE4 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Ccdc180J3QNE4 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Ccdc180J3QNE4 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
Ccdc180J3QNE4 Gm9002-201ENSMUST00000178437 499 ntBASIC26.52■■□□□ 1.84
Ccdc180J3QNE4 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC26.52■■□□□ 1.84
Ccdc180J3QNE4 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
Ccdc180J3QNE4 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Ccdc180J3QNE4 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC26.52■■□□□ 1.84
Ccdc180J3QNE4 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC26.52■■□□□ 1.84
Ccdc180J3QNE4 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC26.51■■□□□ 1.84
Ccdc180J3QNE4 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Ccdc180J3QNE4 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC26.51■■□□□ 1.83
Ccdc180J3QNE4 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC26.51■■□□□ 1.83
Ccdc180J3QNE4 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Ccdc180J3QNE4 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC26.51■■□□□ 1.83
Ccdc180J3QNE4 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Ccdc180J3QNE4 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC26.51■■□□□ 1.83
Ccdc180J3QNE4 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC26.51■■□□□ 1.83
Ccdc180J3QNE4 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC26.51■■□□□ 1.83
Ccdc180J3QNE4 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC26.51■■□□□ 1.83
Ccdc180J3QNE4 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC26.51■■□□□ 1.83
Ccdc180J3QNE4 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC26.5■■□□□ 1.83
Ccdc180J3QNE4 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC26.5■■□□□ 1.83
Ccdc180J3QNE4 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC26.5■■□□□ 1.83
Ccdc180J3QNE4 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Ccdc180J3QNE4 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC26.5■■□□□ 1.83
Ccdc180J3QNE4 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC26.5■■□□□ 1.83
Ccdc180J3QNE4 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Ccdc180J3QNE4 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Ccdc180J3QNE4 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC26.5■■□□□ 1.83
Ccdc180J3QNE4 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Ccdc180J3QNE4 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC26.5■■□□□ 1.83
Ccdc180J3QNE4 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC26.5■■□□□ 1.83
Ccdc180J3QNE4 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC26.5■■□□□ 1.83
Ccdc180J3QNE4 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC26.5■■□□□ 1.83
Ccdc180J3QNE4 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Ccdc180J3QNE4 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Ccdc180J3QNE4 Gm10584-201ENSMUST00000207036 2628 ntBASIC26.5■■□□□ 1.83
Ccdc180J3QNE4 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
Ccdc180J3QNE4 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC26.5■■□□□ 1.83
Ccdc180J3QNE4 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
Ccdc180J3QNE4 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Ccdc180J3QNE4 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Ccdc180J3QNE4 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Ccdc180J3QNE4 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC26.5■■□□□ 1.83
Ccdc180J3QNE4 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
Ccdc180J3QNE4 Gm5912-201ENSMUST00000122282 1438 ntBASIC26.49■■□□□ 1.83
Ccdc180J3QNE4 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC26.49■■□□□ 1.83
Ccdc180J3QNE4 Gm8131-201ENSMUST00000213783 1570 ntBASIC26.49■■□□□ 1.83
Ccdc180J3QNE4 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Ccdc180J3QNE4 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
Ccdc180J3QNE4 Mir6392-201ENSMUST00000184924 108 ntBASIC26.49■■□□□ 1.83
Ccdc180J3QNE4 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC26.49■■□□□ 1.83
Ccdc180J3QNE4 Gm5356-201ENSMUST00000093326 615 ntBASIC26.49■■□□□ 1.83
Ccdc180J3QNE4 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
Ccdc180J3QNE4 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC26.49■■□□□ 1.83
Ccdc180J3QNE4 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
Ccdc180J3QNE4 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Ccdc180J3QNE4 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Ccdc180J3QNE4 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Ccdc180J3QNE4 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC26.48■■□□□ 1.83
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms