Protein–RNA interactions for Protein: J3QM54

Gm3727, Predicted gene 3727, mousemouse

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3727J3QM54 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gm3727J3QM54 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC12.55□□□□□ -0.4
Gm3727J3QM54 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gm3727J3QM54 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gm3727J3QM54 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Gm3727J3QM54 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gm3727J3QM54 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Gm3727J3QM54 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Gm3727J3QM54 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC12.55□□□□□ -0.4
Gm3727J3QM54 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC12.55□□□□□ -0.4
Gm3727J3QM54 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gm3727J3QM54 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Gm3727J3QM54 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gm3727J3QM54 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gm3727J3QM54 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gm3727J3QM54 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gm3727J3QM54 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gm3727J3QM54 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Gm3727J3QM54 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC12.55□□□□□ -0.4
Gm3727J3QM54 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Gm3727J3QM54 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Gm3727J3QM54 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gm3727J3QM54 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gm3727J3QM54 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gm3727J3QM54 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gm3727J3QM54 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Gm3727J3QM54 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Gm3727J3QM54 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
Gm3727J3QM54 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Gm3727J3QM54 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Gm3727J3QM54 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gm3727J3QM54 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Gm3727J3QM54 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Gm3727J3QM54 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gm3727J3QM54 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC12.54□□□□□ -0.4
Gm3727J3QM54 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gm3727J3QM54 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC12.54□□□□□ -0.4
Gm3727J3QM54 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Gm3727J3QM54 Gm8349-201ENSMUST00000182720 1003 ntBASIC12.54□□□□□ -0.4
Gm3727J3QM54 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC12.54□□□□□ -0.4
Gm3727J3QM54 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC12.54□□□□□ -0.4
Gm3727J3QM54 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Gm3727J3QM54 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Gm3727J3QM54 CT009510.1-201ENSMUST00000227972 270 ntBASIC12.54□□□□□ -0.4
Gm3727J3QM54 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gm3727J3QM54 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC12.54□□□□□ -0.4
Gm3727J3QM54 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gm3727J3QM54 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Gm3727J3QM54 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Gm3727J3QM54 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gm3727J3QM54 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gm3727J3QM54 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gm3727J3QM54 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Gm3727J3QM54 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gm3727J3QM54 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Gm3727J3QM54 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Gm3727J3QM54 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC12.53□□□□□ -0.4
Gm3727J3QM54 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Gm3727J3QM54 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Gm3727J3QM54 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Gm3727J3QM54 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Gm3727J3QM54 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Gm3727J3QM54 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Gm3727J3QM54 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Gm3727J3QM54 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Gm3727J3QM54 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Gm3727J3QM54 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Gm3727J3QM54 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC12.53□□□□□ -0.4
Gm3727J3QM54 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Gm3727J3QM54 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Gm3727J3QM54 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Gm3727J3QM54 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Gm3727J3QM54 Gm27389-201ENSMUST00000183622 195 ntBASIC12.53□□□□□ -0.4
Gm3727J3QM54 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC12.53□□□□□ -0.4
Gm3727J3QM54 AC130713.1-201ENSMUST00000228853 1096 ntBASIC12.53□□□□□ -0.4
Gm3727J3QM54 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Gm3727J3QM54 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Gm3727J3QM54 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Gm3727J3QM54 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Gm3727J3QM54 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Gm3727J3QM54 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Gm3727J3QM54 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Gm3727J3QM54 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Gm3727J3QM54 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Gm3727J3QM54 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Gm3727J3QM54 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Gm3727J3QM54 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC12.53□□□□□ -0.4
Gm3727J3QM54 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Gm3727J3QM54 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Gm3727J3QM54 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Gm3727J3QM54 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Gm3727J3QM54 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Gm3727J3QM54 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Gm3727J3QM54 Acot6-202ENSMUST00000222921 3622 ntBASIC12.52□□□□□ -0.4
Gm3727J3QM54 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Gm3727J3QM54 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Gm3727J3QM54 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC12.52□□□□□ -0.41
Gm3727J3QM54 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Gm3727J3QM54 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Gm3727J3QM54 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms