Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Shank1D3YZU1 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Shank1D3YZU1 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Shank1D3YZU1 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Shank1D3YZU1 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Shank1D3YZU1 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Shank1D3YZU1 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Shank1D3YZU1 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Shank1D3YZU1 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Shank1D3YZU1 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Shank1D3YZU1 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Shank1D3YZU1 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Shank1D3YZU1 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
Shank1D3YZU1 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Shank1D3YZU1 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC13.22□□□□□ -0.29
Shank1D3YZU1 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Shank1D3YZU1 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Shank1D3YZU1 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Shank1D3YZU1 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Shank1D3YZU1 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Shank1D3YZU1 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Shank1D3YZU1 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Shank1D3YZU1 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC13.22□□□□□ -0.29
Shank1D3YZU1 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Shank1D3YZU1 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Shank1D3YZU1 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Shank1D3YZU1 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Shank1D3YZU1 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Shank1D3YZU1 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Shank1D3YZU1 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Shank1D3YZU1 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Shank1D3YZU1 Gm3436-201ENSMUST00000179930 840 ntBASIC13.21□□□□□ -0.29
Shank1D3YZU1 Gm45195-201ENSMUST00000205597 1008 ntBASIC13.21□□□□□ -0.29
Shank1D3YZU1 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC13.21□□□□□ -0.29
Shank1D3YZU1 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Shank1D3YZU1 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC13.21□□□□□ -0.29
Shank1D3YZU1 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Shank1D3YZU1 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Shank1D3YZU1 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC13.21□□□□□ -0.29
Shank1D3YZU1 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Shank1D3YZU1 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Shank1D3YZU1 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Shank1D3YZU1 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC13.21□□□□□ -0.3
Shank1D3YZU1 Gm15653-201ENSMUST00000119247 907 ntBASIC13.21□□□□□ -0.3
Shank1D3YZU1 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC13.21□□□□□ -0.3
Shank1D3YZU1 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Shank1D3YZU1 Gm21854-201ENSMUST00000179901 471 ntBASIC13.21□□□□□ -0.3
Shank1D3YZU1 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC13.21□□□□□ -0.3
Shank1D3YZU1 Mir6420-201ENSMUST00000185032 102 ntBASIC13.21□□□□□ -0.3
Shank1D3YZU1 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC13.21□□□□□ -0.3
Shank1D3YZU1 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
Shank1D3YZU1 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
Shank1D3YZU1 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Shank1D3YZU1 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Shank1D3YZU1 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
Shank1D3YZU1 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Shank1D3YZU1 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Shank1D3YZU1 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Shank1D3YZU1 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Shank1D3YZU1 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Shank1D3YZU1 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Shank1D3YZU1 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Shank1D3YZU1 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Shank1D3YZU1 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Shank1D3YZU1 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Shank1D3YZU1 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Shank1D3YZU1 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Shank1D3YZU1 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Shank1D3YZU1 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Shank1D3YZU1 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Shank1D3YZU1 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC13.2□□□□□ -0.3
Shank1D3YZU1 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Shank1D3YZU1 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Shank1D3YZU1 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Shank1D3YZU1 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Shank1D3YZU1 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Shank1D3YZU1 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Shank1D3YZU1 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Shank1D3YZU1 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Shank1D3YZU1 Gm8131-201ENSMUST00000213783 1570 ntBASIC13.2□□□□□ -0.3
Shank1D3YZU1 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Shank1D3YZU1 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Shank1D3YZU1 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Shank1D3YZU1 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Shank1D3YZU1 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Shank1D3YZU1 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC13.2□□□□□ -0.3
Shank1D3YZU1 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Shank1D3YZU1 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC13.2□□□□□ -0.3
Shank1D3YZU1 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC13.2□□□□□ -0.3
Shank1D3YZU1 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Shank1D3YZU1 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Shank1D3YZU1 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Shank1D3YZU1 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Shank1D3YZU1 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Shank1D3YZU1 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Shank1D3YZU1 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Shank1D3YZU1 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Shank1D3YZU1 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Shank1D3YZU1 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Shank1D3YZU1 Gm11918-201ENSMUST00000121660 179 ntBASIC13.19□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms