Protein–RNA interactions for Protein: B2RT89

Slc22a28, Predicted gene, EG434674, mousemouse

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc22a28B2RT89 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Slc22a28B2RT89 Gm43347-201ENSMUST00000200226 580 ntBASIC13.63□□□□□ -0.23
Slc22a28B2RT89 Rps4l-201ENSMUST00000071745 943 ntBASIC13.63□□□□□ -0.23
Slc22a28B2RT89 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Slc22a28B2RT89 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Slc22a28B2RT89 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Slc22a28B2RT89 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Slc22a28B2RT89 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC13.63□□□□□ -0.23
Slc22a28B2RT89 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Slc22a28B2RT89 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Slc22a28B2RT89 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Slc22a28B2RT89 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Slc22a28B2RT89 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Slc22a28B2RT89 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Slc22a28B2RT89 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Slc22a28B2RT89 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Slc22a28B2RT89 AC119177.1-201ENSMUST00000227647 1332 ntBASIC13.63□□□□□ -0.23
Slc22a28B2RT89 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
Slc22a28B2RT89 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC13.63□□□□□ -0.23
Slc22a28B2RT89 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Slc22a28B2RT89 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Slc22a28B2RT89 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Slc22a28B2RT89 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Slc22a28B2RT89 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC13.62□□□□□ -0.23
Slc22a28B2RT89 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Slc22a28B2RT89 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Slc22a28B2RT89 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Slc22a28B2RT89 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Slc22a28B2RT89 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Slc22a28B2RT89 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Slc22a28B2RT89 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC13.62□□□□□ -0.23
Slc22a28B2RT89 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Slc22a28B2RT89 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Slc22a28B2RT89 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC13.62□□□□□ -0.23
Slc22a28B2RT89 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Slc22a28B2RT89 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
Slc22a28B2RT89 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Slc22a28B2RT89 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC13.62□□□□□ -0.23
Slc22a28B2RT89 Gm18246-201ENSMUST00000221023 728 ntBASIC13.62□□□□□ -0.23
Slc22a28B2RT89 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Slc22a28B2RT89 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Slc22a28B2RT89 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Slc22a28B2RT89 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Slc22a28B2RT89 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Slc22a28B2RT89 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC13.62□□□□□ -0.23
Slc22a28B2RT89 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Slc22a28B2RT89 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Slc22a28B2RT89 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Slc22a28B2RT89 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Slc22a28B2RT89 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Slc22a28B2RT89 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Slc22a28B2RT89 Gm5366-201ENSMUST00000215494 1338 ntBASIC13.62□□□□□ -0.23
Slc22a28B2RT89 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Slc22a28B2RT89 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Slc22a28B2RT89 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Slc22a28B2RT89 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Slc22a28B2RT89 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Slc22a28B2RT89 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Slc22a28B2RT89 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC13.61□□□□□ -0.23
Slc22a28B2RT89 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Slc22a28B2RT89 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
Slc22a28B2RT89 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Slc22a28B2RT89 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Slc22a28B2RT89 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Slc22a28B2RT89 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Slc22a28B2RT89 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Slc22a28B2RT89 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Slc22a28B2RT89 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Slc22a28B2RT89 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Slc22a28B2RT89 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Slc22a28B2RT89 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Slc22a28B2RT89 Gm28033-201ENSMUST00000184224 96 ntBASIC13.61□□□□□ -0.23
Slc22a28B2RT89 Gm27459-201ENSMUST00000184860 107 ntBASIC13.61□□□□□ -0.23
Slc22a28B2RT89 Ank2-226ENSMUST00000189368 339 ntBASIC13.61□□□□□ -0.23
Slc22a28B2RT89 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Slc22a28B2RT89 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC13.61□□□□□ -0.23
Slc22a28B2RT89 AC155729.1-201ENSMUST00000227758 544 ntBASIC13.61□□□□□ -0.23
Slc22a28B2RT89 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Slc22a28B2RT89 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Slc22a28B2RT89 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Slc22a28B2RT89 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Slc22a28B2RT89 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC13.61□□□□□ -0.23
Slc22a28B2RT89 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Slc22a28B2RT89 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Slc22a28B2RT89 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
Slc22a28B2RT89 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Slc22a28B2RT89 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Slc22a28B2RT89 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC13.61□□□□□ -0.23
Slc22a28B2RT89 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Slc22a28B2RT89 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Slc22a28B2RT89 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC13.6□□□□□ -0.23
Slc22a28B2RT89 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Slc22a28B2RT89 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Slc22a28B2RT89 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Slc22a28B2RT89 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC13.6□□□□□ -0.23
Slc22a28B2RT89 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Slc22a28B2RT89 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Slc22a28B2RT89 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Slc22a28B2RT89 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC13.6□□□□□ -0.23
Slc22a28B2RT89 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 56.8 ms