Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Gm17794-201ENSMUST00000220252 955 ntBASIC14.94□□□□□ -0.02
Col4a6B1AVK5 AC156560.2-201ENSMUST00000221232 264 ntBASIC14.94□□□□□ -0.02
Col4a6B1AVK5 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col4a6B1AVK5 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC14.94□□□□□ -0.02
Col4a6B1AVK5 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col4a6B1AVK5 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Col4a6B1AVK5 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col4a6B1AVK5 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col4a6B1AVK5 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC14.94□□□□□ -0.02
Col4a6B1AVK5 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col4a6B1AVK5 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col4a6B1AVK5 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC14.94□□□□□ -0.02
Col4a6B1AVK5 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col4a6B1AVK5 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC14.94□□□□□ -0.02
Col4a6B1AVK5 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col4a6B1AVK5 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col4a6B1AVK5 Gm8775-201ENSMUST00000170943 1327 ntBASIC14.94□□□□□ -0.02
Col4a6B1AVK5 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Col4a6B1AVK5 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col4a6B1AVK5 Gm23931-201ENSMUST00000103842 109 ntBASIC14.93□□□□□ -0.02
Col4a6B1AVK5 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
Col4a6B1AVK5 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Col4a6B1AVK5 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Col4a6B1AVK5 Mir1982-201ENSMUST00000157368 74 ntBASIC14.93□□□□□ -0.02
Col4a6B1AVK5 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC14.93□□□□□ -0.02
Col4a6B1AVK5 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col4a6B1AVK5 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC14.93□□□□□ -0.02
Col4a6B1AVK5 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col4a6B1AVK5 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Col4a6B1AVK5 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Col4a6B1AVK5 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Col4a6B1AVK5 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Col4a6B1AVK5 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col4a6B1AVK5 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Col4a6B1AVK5 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col4a6B1AVK5 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Col4a6B1AVK5 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC14.93□□□□□ -0.02
Col4a6B1AVK5 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col4a6B1AVK5 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col4a6B1AVK5 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC14.93□□□□□ -0.02
Col4a6B1AVK5 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Col4a6B1AVK5 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Col4a6B1AVK5 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col4a6B1AVK5 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col4a6B1AVK5 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col4a6B1AVK5 Gm14660-201ENSMUST00000119809 575 ntBASIC14.93□□□□□ -0.02
Col4a6B1AVK5 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col4a6B1AVK5 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC14.93□□□□□ -0.02
Col4a6B1AVK5 Gm4804-201ENSMUST00000182234 999 ntBASIC14.93□□□□□ -0.02
Col4a6B1AVK5 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC14.93□□□□□ -0.02
Col4a6B1AVK5 Gm44608-201ENSMUST00000206827 855 ntBASIC14.93□□□□□ -0.02
Col4a6B1AVK5 AC155258.1-201ENSMUST00000219303 253 ntBASIC14.93□□□□□ -0.02
Col4a6B1AVK5 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col4a6B1AVK5 AC174678.1-201ENSMUST00000228007 2749 ntBASIC14.93□□□□□ -0.02
Col4a6B1AVK5 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col4a6B1AVK5 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col4a6B1AVK5 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Col4a6B1AVK5 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col4a6B1AVK5 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Col4a6B1AVK5 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC14.92□□□□□ -0.02
Col4a6B1AVK5 Gm42901-201ENSMUST00000197735 3171 ntBASIC14.92□□□□□ -0.02
Col4a6B1AVK5 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col4a6B1AVK5 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col4a6B1AVK5 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC14.92□□□□□ -0.02
Col4a6B1AVK5 Gm13034-201ENSMUST00000121342 3177 ntBASIC14.92□□□□□ -0.02
Col4a6B1AVK5 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Col4a6B1AVK5 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col4a6B1AVK5 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col4a6B1AVK5 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC14.92□□□□□ -0.02
Col4a6B1AVK5 Gm12742-201ENSMUST00000117326 410 ntBASIC14.92□□□□□ -0.02
Col4a6B1AVK5 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Col4a6B1AVK5 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC14.92□□□□□ -0.02
Col4a6B1AVK5 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Col4a6B1AVK5 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Col4a6B1AVK5 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col4a6B1AVK5 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Col4a6B1AVK5 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Col4a6B1AVK5 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Col4a6B1AVK5 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Col4a6B1AVK5 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col4a6B1AVK5 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col4a6B1AVK5 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col4a6B1AVK5 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col4a6B1AVK5 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Col4a6B1AVK5 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC14.92□□□□□ -0.02
Col4a6B1AVK5 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col4a6B1AVK5 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Col4a6B1AVK5 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC14.91□□□□□ -0.02
Col4a6B1AVK5 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col4a6B1AVK5 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col4a6B1AVK5 Gm43352-201ENSMUST00000196419 3065 ntBASIC14.91□□□□□ -0.02
Col4a6B1AVK5 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Col4a6B1AVK5 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC14.91□□□□□ -0.02
Col4a6B1AVK5 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col4a6B1AVK5 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Col4a6B1AVK5 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col4a6B1AVK5 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col4a6B1AVK5 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC14.91□□□□□ -0.02
Col4a6B1AVK5 AL645783.1-201ENSMUST00000221416 1832 ntBASIC14.91□□□□□ -0.02
Col4a6B1AVK5 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms