Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col6a4A2AX52 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Col6a4A2AX52 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Col6a4A2AX52 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Col6a4A2AX52 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col6a4A2AX52 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col6a4A2AX52 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col6a4A2AX52 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col6a4A2AX52 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col6a4A2AX52 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col6a4A2AX52 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col6a4A2AX52 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col6a4A2AX52 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Col6a4A2AX52 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC12.43□□□□□ -0.42
Col6a4A2AX52 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC12.43□□□□□ -0.42
Col6a4A2AX52 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col6a4A2AX52 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC12.43□□□□□ -0.42
Col6a4A2AX52 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Col6a4A2AX52 AC166349.1-201ENSMUST00000220866 695 ntBASIC12.43□□□□□ -0.42
Col6a4A2AX52 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col6a4A2AX52 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col6a4A2AX52 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC12.43□□□□□ -0.42
Col6a4A2AX52 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col6a4A2AX52 AC131743.5-201ENSMUST00000220775 1618 ntBASIC12.43□□□□□ -0.42
Col6a4A2AX52 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col6a4A2AX52 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Col6a4A2AX52 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Col6a4A2AX52 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col6a4A2AX52 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col6a4A2AX52 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Col6a4A2AX52 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col6a4A2AX52 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Col6a4A2AX52 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col6a4A2AX52 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Col6a4A2AX52 Gm11425-201ENSMUST00000119608 498 ntBASIC12.43□□□□□ -0.42
Col6a4A2AX52 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col6a4A2AX52 Mir1938-201ENSMUST00000158746 100 ntBASIC12.43□□□□□ -0.42
Col6a4A2AX52 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC12.43□□□□□ -0.42
Col6a4A2AX52 Gm45195-201ENSMUST00000205597 1008 ntBASIC12.43□□□□□ -0.42
Col6a4A2AX52 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col6a4A2AX52 Gm20445-201ENSMUST00000061905 565 ntBASIC12.43□□□□□ -0.42
Col6a4A2AX52 Gm9396-201ENSMUST00000076703 567 ntBASIC12.43□□□□□ -0.42
Col6a4A2AX52 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col6a4A2AX52 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col6a4A2AX52 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Col6a4A2AX52 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC12.43□□□□□ -0.42
Col6a4A2AX52 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC12.42□□□□□ -0.42
Col6a4A2AX52 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col6a4A2AX52 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col6a4A2AX52 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col6a4A2AX52 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col6a4A2AX52 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col6a4A2AX52 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col6a4A2AX52 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Col6a4A2AX52 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col6a4A2AX52 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC12.42□□□□□ -0.42
Col6a4A2AX52 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC12.42□□□□□ -0.42
Col6a4A2AX52 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
Col6a4A2AX52 Gm21854-201ENSMUST00000179901 471 ntBASIC12.42□□□□□ -0.42
Col6a4A2AX52 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC12.42□□□□□ -0.42
Col6a4A2AX52 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Col6a4A2AX52 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col6a4A2AX52 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC12.42□□□□□ -0.42
Col6a4A2AX52 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col6a4A2AX52 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Col6a4A2AX52 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col6a4A2AX52 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col6a4A2AX52 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col6a4A2AX52 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Col6a4A2AX52 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col6a4A2AX52 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col6a4A2AX52 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col6a4A2AX52 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col6a4A2AX52 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col6a4A2AX52 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Col6a4A2AX52 Mir1247-201ENSMUST00000116706 82 ntBASIC12.42□□□□□ -0.42
Col6a4A2AX52 Gm15824-201ENSMUST00000119516 955 ntBASIC12.42□□□□□ -0.42
Col6a4A2AX52 Gm17150-201ENSMUST00000165577 381 ntBASIC12.42□□□□□ -0.42
Col6a4A2AX52 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC12.42□□□□□ -0.42
Col6a4A2AX52 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC12.42□□□□□ -0.42
Col6a4A2AX52 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col6a4A2AX52 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Col6a4A2AX52 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Col6a4A2AX52 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Col6a4A2AX52 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col6a4A2AX52 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col6a4A2AX52 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col6a4A2AX52 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Col6a4A2AX52 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col6a4A2AX52 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Col6a4A2AX52 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC12.41□□□□□ -0.42
Col6a4A2AX52 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col6a4A2AX52 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Col6a4A2AX52 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Col6a4A2AX52 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC12.41□□□□□ -0.42
Col6a4A2AX52 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC12.41□□□□□ -0.42
Col6a4A2AX52 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Col6a4A2AX52 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Col6a4A2AX52 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC12.41□□□□□ -0.42
Col6a4A2AX52 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC12.41□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms