Protein–RNA interactions for Protein: A0A0G2LB96

Trbv29, T cell receptor beta, variable 29 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv29A0A0G2LB96 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trbv29A0A0G2LB96 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Trbv29A0A0G2LB96 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
Trbv29A0A0G2LB96 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trbv29A0A0G2LB96 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC12.27□□□□□ -0.45
Trbv29A0A0G2LB96 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Trbv29A0A0G2LB96 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trbv29A0A0G2LB96 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trbv29A0A0G2LB96 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.45
Trbv29A0A0G2LB96 Gm5253-201ENSMUST00000187104 1025 ntBASIC12.27□□□□□ -0.45
Trbv29A0A0G2LB96 Gm37153-201ENSMUST00000193637 231 ntBASIC12.27□□□□□ -0.45
Trbv29A0A0G2LB96 Gm9682-201ENSMUST00000197505 556 ntBASIC12.27□□□□□ -0.45
Trbv29A0A0G2LB96 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC12.27□□□□□ -0.45
Trbv29A0A0G2LB96 CT010506.4-201ENSMUST00000225457 351 ntBASIC12.27□□□□□ -0.45
Trbv29A0A0G2LB96 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trbv29A0A0G2LB96 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trbv29A0A0G2LB96 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trbv29A0A0G2LB96 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trbv29A0A0G2LB96 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC12.27□□□□□ -0.45
Trbv29A0A0G2LB96 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trbv29A0A0G2LB96 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trbv29A0A0G2LB96 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Trbv29A0A0G2LB96 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Trbv29A0A0G2LB96 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trbv29A0A0G2LB96 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trbv29A0A0G2LB96 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trbv29A0A0G2LB96 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Trbv29A0A0G2LB96 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trbv29A0A0G2LB96 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC12.27□□□□□ -0.45
Trbv29A0A0G2LB96 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trbv29A0A0G2LB96 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trbv29A0A0G2LB96 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trbv29A0A0G2LB96 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trbv29A0A0G2LB96 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trbv29A0A0G2LB96 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trbv29A0A0G2LB96 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC12.26□□□□□ -0.45
Trbv29A0A0G2LB96 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trbv29A0A0G2LB96 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trbv29A0A0G2LB96 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trbv29A0A0G2LB96 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trbv29A0A0G2LB96 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trbv29A0A0G2LB96 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trbv29A0A0G2LB96 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trbv29A0A0G2LB96 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trbv29A0A0G2LB96 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trbv29A0A0G2LB96 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trbv29A0A0G2LB96 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trbv29A0A0G2LB96 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trbv29A0A0G2LB96 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Trbv29A0A0G2LB96 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trbv29A0A0G2LB96 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trbv29A0A0G2LB96 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC12.26□□□□□ -0.45
Trbv29A0A0G2LB96 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC12.26□□□□□ -0.45
Trbv29A0A0G2LB96 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC12.26□□□□□ -0.45
Trbv29A0A0G2LB96 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC12.26□□□□□ -0.45
Trbv29A0A0G2LB96 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC12.26□□□□□ -0.45
Trbv29A0A0G2LB96 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trbv29A0A0G2LB96 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trbv29A0A0G2LB96 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Trbv29A0A0G2LB96 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
Trbv29A0A0G2LB96 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trbv29A0A0G2LB96 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trbv29A0A0G2LB96 Gm3928-201ENSMUST00000121141 1307 ntBASIC12.26□□□□□ -0.45
Trbv29A0A0G2LB96 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC12.26□□□□□ -0.45
Trbv29A0A0G2LB96 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC12.26□□□□□ -0.45
Trbv29A0A0G2LB96 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trbv29A0A0G2LB96 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC12.26□□□□□ -0.45
Trbv29A0A0G2LB96 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trbv29A0A0G2LB96 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trbv29A0A0G2LB96 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Trbv29A0A0G2LB96 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC12.26□□□□□ -0.45
Trbv29A0A0G2LB96 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Trbv29A0A0G2LB96 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC12.26□□□□□ -0.45
Trbv29A0A0G2LB96 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trbv29A0A0G2LB96 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Trbv29A0A0G2LB96 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Trbv29A0A0G2LB96 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trbv29A0A0G2LB96 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trbv29A0A0G2LB96 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trbv29A0A0G2LB96 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trbv29A0A0G2LB96 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trbv29A0A0G2LB96 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trbv29A0A0G2LB96 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC12.25□□□□□ -0.45
Trbv29A0A0G2LB96 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trbv29A0A0G2LB96 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC12.25□□□□□ -0.45
Trbv29A0A0G2LB96 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trbv29A0A0G2LB96 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trbv29A0A0G2LB96 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Trbv29A0A0G2LB96 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trbv29A0A0G2LB96 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trbv29A0A0G2LB96 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trbv29A0A0G2LB96 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trbv29A0A0G2LB96 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Trbv29A0A0G2LB96 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC12.25□□□□□ -0.45
Trbv29A0A0G2LB96 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trbv29A0A0G2LB96 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trbv29A0A0G2LB96 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC12.25□□□□□ -0.45
Trbv29A0A0G2LB96 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trbv29A0A0G2LB96 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trbv29A0A0G2LB96 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms