Protein–RNA interactions for Protein: A0A075B6B5

Trav6-5, T cell receptor alpha variable 6-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-5A0A075B6B5 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav6-5A0A075B6B5 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trav6-5A0A075B6B5 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav6-5A0A075B6B5 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trav6-5A0A075B6B5 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Trav6-5A0A075B6B5 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trav6-5A0A075B6B5 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav6-5A0A075B6B5 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav6-5A0A075B6B5 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC11.43□□□□□ -0.58
Trav6-5A0A075B6B5 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trav6-5A0A075B6B5 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC11.43□□□□□ -0.58
Trav6-5A0A075B6B5 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC11.43□□□□□ -0.58
Trav6-5A0A075B6B5 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC11.43□□□□□ -0.58
Trav6-5A0A075B6B5 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav6-5A0A075B6B5 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC11.43□□□□□ -0.58
Trav6-5A0A075B6B5 AC155729.1-201ENSMUST00000227758 544 ntBASIC11.43□□□□□ -0.58
Trav6-5A0A075B6B5 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Trav6-5A0A075B6B5 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav6-5A0A075B6B5 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav6-5A0A075B6B5 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC11.43□□□□□ -0.58
Trav6-5A0A075B6B5 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav6-5A0A075B6B5 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav6-5A0A075B6B5 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav6-5A0A075B6B5 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trav6-5A0A075B6B5 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav6-5A0A075B6B5 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trav6-5A0A075B6B5 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav6-5A0A075B6B5 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav6-5A0A075B6B5 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav6-5A0A075B6B5 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Trav6-5A0A075B6B5 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trav6-5A0A075B6B5 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav6-5A0A075B6B5 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Trav6-5A0A075B6B5 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav6-5A0A075B6B5 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav6-5A0A075B6B5 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav6-5A0A075B6B5 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav6-5A0A075B6B5 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC11.42□□□□□ -0.58
Trav6-5A0A075B6B5 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav6-5A0A075B6B5 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Trav6-5A0A075B6B5 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav6-5A0A075B6B5 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Trav6-5A0A075B6B5 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav6-5A0A075B6B5 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav6-5A0A075B6B5 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav6-5A0A075B6B5 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav6-5A0A075B6B5 AC121805.2-201ENSMUST00000218808 2538 ntBASIC11.42□□□□□ -0.58
Trav6-5A0A075B6B5 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav6-5A0A075B6B5 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav6-5A0A075B6B5 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav6-5A0A075B6B5 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav6-5A0A075B6B5 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav6-5A0A075B6B5 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trav6-5A0A075B6B5 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav6-5A0A075B6B5 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC11.42□□□□□ -0.58
Trav6-5A0A075B6B5 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC11.42□□□□□ -0.58
Trav6-5A0A075B6B5 Gm18959-201ENSMUST00000208954 655 ntBASIC11.42□□□□□ -0.58
Trav6-5A0A075B6B5 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Trav6-5A0A075B6B5 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trav6-5A0A075B6B5 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav6-5A0A075B6B5 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav6-5A0A075B6B5 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Trav6-5A0A075B6B5 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav6-5A0A075B6B5 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav6-5A0A075B6B5 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC11.42□□□□□ -0.58
Trav6-5A0A075B6B5 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav6-5A0A075B6B5 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav6-5A0A075B6B5 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trav6-5A0A075B6B5 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav6-5A0A075B6B5 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav6-5A0A075B6B5 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav6-5A0A075B6B5 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Trav6-5A0A075B6B5 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav6-5A0A075B6B5 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav6-5A0A075B6B5 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trav6-5A0A075B6B5 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav6-5A0A075B6B5 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav6-5A0A075B6B5 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav6-5A0A075B6B5 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav6-5A0A075B6B5 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav6-5A0A075B6B5 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC11.41□□□□□ -0.58
Trav6-5A0A075B6B5 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Trav6-5A0A075B6B5 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav6-5A0A075B6B5 Mir770-201ENSMUST00000103252 94 ntBASIC11.41□□□□□ -0.58
Trav6-5A0A075B6B5 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC11.41□□□□□ -0.58
Trav6-5A0A075B6B5 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC11.41□□□□□ -0.58
Trav6-5A0A075B6B5 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC11.41□□□□□ -0.58
Trav6-5A0A075B6B5 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trav6-5A0A075B6B5 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav6-5A0A075B6B5 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav6-5A0A075B6B5 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav6-5A0A075B6B5 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trav6-5A0A075B6B5 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Trav6-5A0A075B6B5 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav6-5A0A075B6B5 Gm4081-201ENSMUST00000195287 1838 ntBASIC11.41□□□□□ -0.58
Trav6-5A0A075B6B5 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Trav6-5A0A075B6B5 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Trav6-5A0A075B6B5 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav6-5A0A075B6B5 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav6-5A0A075B6B5 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms