Protein–RNA interactions for Protein: A0A075B633

Trav8n-2, T cell receptor alpha variable 8n-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8n-2A0A075B633 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trav8n-2A0A075B633 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav8n-2A0A075B633 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC13.48□□□□□ -0.25
Trav8n-2A0A075B633 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Trav8n-2A0A075B633 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav8n-2A0A075B633 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Trav8n-2A0A075B633 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC13.48□□□□□ -0.25
Trav8n-2A0A075B633 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav8n-2A0A075B633 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav8n-2A0A075B633 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav8n-2A0A075B633 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav8n-2A0A075B633 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC13.48□□□□□ -0.25
Trav8n-2A0A075B633 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav8n-2A0A075B633 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC13.48□□□□□ -0.25
Trav8n-2A0A075B633 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trav8n-2A0A075B633 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav8n-2A0A075B633 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav8n-2A0A075B633 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav8n-2A0A075B633 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav8n-2A0A075B633 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav8n-2A0A075B633 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav8n-2A0A075B633 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav8n-2A0A075B633 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC13.48□□□□□ -0.25
Trav8n-2A0A075B633 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Trav8n-2A0A075B633 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Trav8n-2A0A075B633 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav8n-2A0A075B633 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav8n-2A0A075B633 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trav8n-2A0A075B633 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Trav8n-2A0A075B633 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav8n-2A0A075B633 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav8n-2A0A075B633 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav8n-2A0A075B633 Gm6263-201ENSMUST00000120029 1342 ntBASIC13.47□□□□□ -0.25
Trav8n-2A0A075B633 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav8n-2A0A075B633 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav8n-2A0A075B633 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav8n-2A0A075B633 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav8n-2A0A075B633 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Trav8n-2A0A075B633 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trav8n-2A0A075B633 Gm23984-201ENSMUST00000157139 203 ntBASIC13.47□□□□□ -0.25
Trav8n-2A0A075B633 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav8n-2A0A075B633 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav8n-2A0A075B633 Gm18018-201ENSMUST00000198273 408 ntBASIC13.47□□□□□ -0.25
Trav8n-2A0A075B633 Gm43703-201ENSMUST00000200523 763 ntBASIC13.47□□□□□ -0.25
Trav8n-2A0A075B633 Gm45195-201ENSMUST00000205597 1008 ntBASIC13.47□□□□□ -0.25
Trav8n-2A0A075B633 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC13.47□□□□□ -0.25
Trav8n-2A0A075B633 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC13.47□□□□□ -0.25
Trav8n-2A0A075B633 Gm45453-201ENSMUST00000211758 853 ntBASIC13.47□□□□□ -0.25
Trav8n-2A0A075B633 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav8n-2A0A075B633 Gm9229-201ENSMUST00000222777 126 ntBASIC13.47□□□□□ -0.25
Trav8n-2A0A075B633 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav8n-2A0A075B633 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Trav8n-2A0A075B633 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC13.47□□□□□ -0.25
Trav8n-2A0A075B633 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav8n-2A0A075B633 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav8n-2A0A075B633 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav8n-2A0A075B633 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav8n-2A0A075B633 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav8n-2A0A075B633 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav8n-2A0A075B633 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav8n-2A0A075B633 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav8n-2A0A075B633 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav8n-2A0A075B633 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav8n-2A0A075B633 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Trav8n-2A0A075B633 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC13.47□□□□□ -0.25
Trav8n-2A0A075B633 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav8n-2A0A075B633 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC13.47□□□□□ -0.25
Trav8n-2A0A075B633 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav8n-2A0A075B633 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav8n-2A0A075B633 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trav8n-2A0A075B633 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Trav8n-2A0A075B633 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trav8n-2A0A075B633 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav8n-2A0A075B633 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav8n-2A0A075B633 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav8n-2A0A075B633 Gm5049-201ENSMUST00000195878 1590 ntBASIC13.46□□□□□ -0.25
Trav8n-2A0A075B633 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav8n-2A0A075B633 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC13.46□□□□□ -0.25
Trav8n-2A0A075B633 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav8n-2A0A075B633 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Trav8n-2A0A075B633 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav8n-2A0A075B633 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav8n-2A0A075B633 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav8n-2A0A075B633 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trav8n-2A0A075B633 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC13.46□□□□□ -0.25
Trav8n-2A0A075B633 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC13.46□□□□□ -0.25
Trav8n-2A0A075B633 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC13.46□□□□□ -0.25
Trav8n-2A0A075B633 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC13.46□□□□□ -0.25
Trav8n-2A0A075B633 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav8n-2A0A075B633 Gm45384-201ENSMUST00000210451 277 ntBASIC13.46□□□□□ -0.25
Trav8n-2A0A075B633 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC13.46□□□□□ -0.25
Trav8n-2A0A075B633 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav8n-2A0A075B633 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC13.46□□□□□ -0.25
Trav8n-2A0A075B633 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav8n-2A0A075B633 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav8n-2A0A075B633 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav8n-2A0A075B633 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trav8n-2A0A075B633 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC13.46□□□□□ -0.26
Trav8n-2A0A075B633 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Trav8n-2A0A075B633 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms