Protein–RNA interactions for Protein: Q9WU84

Ccs, Copper chaperone for superoxide dismutase, mousemouse

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcsQ9WU84 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
CcsQ9WU84 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
CcsQ9WU84 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
CcsQ9WU84 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
CcsQ9WU84 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
CcsQ9WU84 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
CcsQ9WU84 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
CcsQ9WU84 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
CcsQ9WU84 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
CcsQ9WU84 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
CcsQ9WU84 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
CcsQ9WU84 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
CcsQ9WU84 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
CcsQ9WU84 Gm38327-201ENSMUST00000195852 1755 ntBASIC11.51□□□□□ -0.57
CcsQ9WU84 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
CcsQ9WU84 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
CcsQ9WU84 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
CcsQ9WU84 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC11.51□□□□□ -0.57
CcsQ9WU84 Gm26513-201ENSMUST00000181802 2489 ntBASIC11.51□□□□□ -0.57
CcsQ9WU84 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC11.51□□□□□ -0.57
CcsQ9WU84 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC11.51□□□□□ -0.57
CcsQ9WU84 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC11.51□□□□□ -0.57
CcsQ9WU84 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
CcsQ9WU84 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
CcsQ9WU84 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
CcsQ9WU84 Gm42928-201ENSMUST00000197338 3339 ntBASIC11.51□□□□□ -0.57
CcsQ9WU84 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
CcsQ9WU84 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
CcsQ9WU84 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
CcsQ9WU84 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
CcsQ9WU84 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
CcsQ9WU84 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
CcsQ9WU84 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
CcsQ9WU84 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC11.51□□□□□ -0.57
CcsQ9WU84 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC11.51□□□□□ -0.57
CcsQ9WU84 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
CcsQ9WU84 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
CcsQ9WU84 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
CcsQ9WU84 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
CcsQ9WU84 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC11.51□□□□□ -0.57
CcsQ9WU84 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
CcsQ9WU84 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
CcsQ9WU84 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
CcsQ9WU84 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
CcsQ9WU84 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
CcsQ9WU84 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
CcsQ9WU84 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC11.51□□□□□ -0.57
CcsQ9WU84 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
CcsQ9WU84 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
CcsQ9WU84 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
CcsQ9WU84 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
CcsQ9WU84 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC11.51□□□□□ -0.57
CcsQ9WU84 Gm30238-201ENSMUST00000195528 2603 ntBASIC11.51□□□□□ -0.57
CcsQ9WU84 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
CcsQ9WU84 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
CcsQ9WU84 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
CcsQ9WU84 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
CcsQ9WU84 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
CcsQ9WU84 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC11.51□□□□□ -0.57
CcsQ9WU84 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
CcsQ9WU84 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
CcsQ9WU84 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
CcsQ9WU84 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
CcsQ9WU84 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC11.5□□□□□ -0.57
CcsQ9WU84 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
CcsQ9WU84 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
CcsQ9WU84 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
CcsQ9WU84 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC11.5□□□□□ -0.57
CcsQ9WU84 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
CcsQ9WU84 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC11.5□□□□□ -0.57
CcsQ9WU84 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
CcsQ9WU84 Gm10052-201ENSMUST00000168019 960 ntBASIC11.5□□□□□ -0.57
CcsQ9WU84 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC11.5□□□□□ -0.57
CcsQ9WU84 Gm27741-201ENSMUST00000185060 237 ntBASIC11.5□□□□□ -0.57
CcsQ9WU84 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC11.5□□□□□ -0.57
CcsQ9WU84 Gm44430-201ENSMUST00000203376 995 ntBASIC11.5□□□□□ -0.57
CcsQ9WU84 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
CcsQ9WU84 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
CcsQ9WU84 Gm7729-201ENSMUST00000050143 801 ntBASIC11.5□□□□□ -0.57
CcsQ9WU84 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
CcsQ9WU84 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
CcsQ9WU84 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
CcsQ9WU84 AC166574.6-201ENSMUST00000227889 1806 ntBASIC11.5□□□□□ -0.57
CcsQ9WU84 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
CcsQ9WU84 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
CcsQ9WU84 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
CcsQ9WU84 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
CcsQ9WU84 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC11.5□□□□□ -0.57
CcsQ9WU84 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
CcsQ9WU84 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
CcsQ9WU84 Gm42829-201ENSMUST00000198417 2585 ntBASIC11.5□□□□□ -0.57
CcsQ9WU84 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
CcsQ9WU84 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC11.5□□□□□ -0.57
CcsQ9WU84 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
CcsQ9WU84 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
CcsQ9WU84 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
CcsQ9WU84 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CcsQ9WU84 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
CcsQ9WU84 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
CcsQ9WU84 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms