Protein–RNA interactions for Protein: Q9ER80

Rtp4, Receptor-transporting protein 4, mousemouse

Known RBP Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtp4Q9ER80 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rtp4Q9ER80 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Rtp4Q9ER80 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Rtp4Q9ER80 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC13.86□□□□□ -0.19
Rtp4Q9ER80 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rtp4Q9ER80 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Rtp4Q9ER80 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rtp4Q9ER80 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Rtp4Q9ER80 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Rtp4Q9ER80 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rtp4Q9ER80 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rtp4Q9ER80 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rtp4Q9ER80 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rtp4Q9ER80 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC13.85□□□□□ -0.19
Rtp4Q9ER80 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rtp4Q9ER80 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rtp4Q9ER80 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Rtp4Q9ER80 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC13.85□□□□□ -0.19
Rtp4Q9ER80 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Rtp4Q9ER80 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC13.85□□□□□ -0.19
Rtp4Q9ER80 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rtp4Q9ER80 Gm6226-201ENSMUST00000117765 1146 ntBASIC13.85□□□□□ -0.19
Rtp4Q9ER80 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC13.85□□□□□ -0.19
Rtp4Q9ER80 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rtp4Q9ER80 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Rtp4Q9ER80 Gm27494-201ENSMUST00000184735 189 ntBASIC13.85□□□□□ -0.19
Rtp4Q9ER80 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC13.85□□□□□ -0.19
Rtp4Q9ER80 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rtp4Q9ER80 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rtp4Q9ER80 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rtp4Q9ER80 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rtp4Q9ER80 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Rtp4Q9ER80 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rtp4Q9ER80 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rtp4Q9ER80 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rtp4Q9ER80 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rtp4Q9ER80 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rtp4Q9ER80 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rtp4Q9ER80 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Rtp4Q9ER80 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rtp4Q9ER80 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Rtp4Q9ER80 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Rtp4Q9ER80 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Rtp4Q9ER80 Gm43509-201ENSMUST00000196551 2594 ntBASIC13.84□□□□□ -0.19
Rtp4Q9ER80 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Rtp4Q9ER80 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Rtp4Q9ER80 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Rtp4Q9ER80 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rtp4Q9ER80 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Rtp4Q9ER80 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC13.84□□□□□ -0.19
Rtp4Q9ER80 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rtp4Q9ER80 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rtp4Q9ER80 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rtp4Q9ER80 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rtp4Q9ER80 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rtp4Q9ER80 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rtp4Q9ER80 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rtp4Q9ER80 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rtp4Q9ER80 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Rtp4Q9ER80 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Rtp4Q9ER80 AC167013.2-201ENSMUST00000228520 2684 ntBASIC13.84□□□□□ -0.19
Rtp4Q9ER80 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Rtp4Q9ER80 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Rtp4Q9ER80 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rtp4Q9ER80 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Rtp4Q9ER80 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rtp4Q9ER80 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
Rtp4Q9ER80 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rtp4Q9ER80 Gm10499-201ENSMUST00000174094 934 ntBASIC13.84□□□□□ -0.19
Rtp4Q9ER80 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Rtp4Q9ER80 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC13.84□□□□□ -0.19
Rtp4Q9ER80 Thap2-203ENSMUST00000218989 527 ntBASIC13.84□□□□□ -0.19
Rtp4Q9ER80 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rtp4Q9ER80 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rtp4Q9ER80 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Rtp4Q9ER80 Gm15823-201ENSMUST00000064305 670 ntBASIC13.84□□□□□ -0.19
Rtp4Q9ER80 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC13.84□□□□□ -0.19
Rtp4Q9ER80 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC13.84□□□□□ -0.19
Rtp4Q9ER80 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rtp4Q9ER80 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Rtp4Q9ER80 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
Rtp4Q9ER80 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rtp4Q9ER80 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rtp4Q9ER80 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Rtp4Q9ER80 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rtp4Q9ER80 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Rtp4Q9ER80 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Rtp4Q9ER80 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Rtp4Q9ER80 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC13.84□□□□□ -0.19
Rtp4Q9ER80 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rtp4Q9ER80 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Rtp4Q9ER80 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rtp4Q9ER80 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Rtp4Q9ER80 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rtp4Q9ER80 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rtp4Q9ER80 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rtp4Q9ER80 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rtp4Q9ER80 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rtp4Q9ER80 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rtp4Q9ER80 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms