Protein–RNA interactions for Protein: Q9ER60

Scn4a, Sodium channel protein type 4 subunit alpha, mousemouse

Predictions only

Length 1,841 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn4aQ9ER60 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC19.79■□□□□ 0.76
Scn4aQ9ER60 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Scn4aQ9ER60 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC19.79■□□□□ 0.76
Scn4aQ9ER60 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC19.79■□□□□ 0.76
Scn4aQ9ER60 Gm5523-201ENSMUST00000180415 997 ntBASIC19.79■□□□□ 0.76
Scn4aQ9ER60 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC19.79■□□□□ 0.76
Scn4aQ9ER60 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Scn4aQ9ER60 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Scn4aQ9ER60 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Scn4aQ9ER60 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC19.78■□□□□ 0.76
Scn4aQ9ER60 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Scn4aQ9ER60 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC19.78■□□□□ 0.76
Scn4aQ9ER60 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC19.78■□□□□ 0.76
Scn4aQ9ER60 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Scn4aQ9ER60 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Scn4aQ9ER60 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Scn4aQ9ER60 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Scn4aQ9ER60 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Scn4aQ9ER60 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Scn4aQ9ER60 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Scn4aQ9ER60 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Scn4aQ9ER60 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC19.78■□□□□ 0.76
Scn4aQ9ER60 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC19.78■□□□□ 0.76
Scn4aQ9ER60 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC19.78■□□□□ 0.76
Scn4aQ9ER60 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Scn4aQ9ER60 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Scn4aQ9ER60 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC19.78■□□□□ 0.76
Scn4aQ9ER60 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Scn4aQ9ER60 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Scn4aQ9ER60 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Scn4aQ9ER60 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Scn4aQ9ER60 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Scn4aQ9ER60 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Scn4aQ9ER60 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Scn4aQ9ER60 Gm45760-201ENSMUST00000212190 1782 ntBASIC19.77■□□□□ 0.76
Scn4aQ9ER60 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Scn4aQ9ER60 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Scn4aQ9ER60 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Scn4aQ9ER60 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC19.77■□□□□ 0.76
Scn4aQ9ER60 Gm25732-201ENSMUST00000175168 60 ntBASIC19.77■□□□□ 0.76
Scn4aQ9ER60 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC19.77■□□□□ 0.76
Scn4aQ9ER60 Gm14267-206ENSMUST00000226870 1209 ntBASIC19.77■□□□□ 0.76
Scn4aQ9ER60 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC19.77■□□□□ 0.76
Scn4aQ9ER60 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC19.77■□□□□ 0.76
Scn4aQ9ER60 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Scn4aQ9ER60 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
Scn4aQ9ER60 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.75
Scn4aQ9ER60 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Scn4aQ9ER60 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Scn4aQ9ER60 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Scn4aQ9ER60 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Scn4aQ9ER60 Sumo2-203ENSMUST00000117589 987 ntTSL 3 BASIC19.76■□□□□ 0.75
Scn4aQ9ER60 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC19.76■□□□□ 0.75
Scn4aQ9ER60 Gm26927-201ENSMUST00000182385 965 ntBASIC19.76■□□□□ 0.75
Scn4aQ9ER60 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC19.76■□□□□ 0.75
Scn4aQ9ER60 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Scn4aQ9ER60 Gm9826-201ENSMUST00000029124 1299 ntBASIC19.76■□□□□ 0.75
Scn4aQ9ER60 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Scn4aQ9ER60 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Scn4aQ9ER60 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Scn4aQ9ER60 Gm37015-201ENSMUST00000192763 1521 ntBASIC19.76■□□□□ 0.75
Scn4aQ9ER60 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Scn4aQ9ER60 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Scn4aQ9ER60 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Scn4aQ9ER60 Gm15371-201ENSMUST00000117057 784 ntBASIC19.76■□□□□ 0.75
Scn4aQ9ER60 Gm38223-201ENSMUST00000194484 695 ntBASIC19.76■□□□□ 0.75
Scn4aQ9ER60 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC19.76■□□□□ 0.75
Scn4aQ9ER60 Zfp36l1-203ENSMUST00000218835 292 ntTSL 3 BASIC19.76■□□□□ 0.75
Scn4aQ9ER60 Gm7046-201ENSMUST00000221351 977 ntBASIC19.76■□□□□ 0.75
Scn4aQ9ER60 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Scn4aQ9ER60 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Scn4aQ9ER60 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Scn4aQ9ER60 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Scn4aQ9ER60 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Scn4aQ9ER60 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Scn4aQ9ER60 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Scn4aQ9ER60 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Scn4aQ9ER60 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Scn4aQ9ER60 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Scn4aQ9ER60 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Scn4aQ9ER60 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Scn4aQ9ER60 AC122371.3-201ENSMUST00000223402 1061 ntBASIC19.75■□□□□ 0.75
Scn4aQ9ER60 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Scn4aQ9ER60 AC161252.3-201ENSMUST00000225465 1549 ntBASIC19.75■□□□□ 0.75
Scn4aQ9ER60 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Scn4aQ9ER60 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Scn4aQ9ER60 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Scn4aQ9ER60 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Scn4aQ9ER60 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Scn4aQ9ER60 Gm13385-201ENSMUST00000121089 220 ntBASIC19.74■□□□□ 0.75
Scn4aQ9ER60 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Scn4aQ9ER60 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Scn4aQ9ER60 Gm25668-201ENSMUST00000157700 129 ntBASIC19.74■□□□□ 0.75
Scn4aQ9ER60 Gm2260-201ENSMUST00000184965 657 ntBASIC19.74■□□□□ 0.75
Scn4aQ9ER60 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Scn4aQ9ER60 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Scn4aQ9ER60 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Scn4aQ9ER60 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC19.74■□□□□ 0.75
Scn4aQ9ER60 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Scn4aQ9ER60 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms