Protein–RNA interactions for Protein: Q9EQH3

Vps35, Vacuolar protein sorting-associated protein 35, mousemouse

Known RBP Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps35Q9EQH3 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC14.82□□□□□ -0.04
Vps35Q9EQH3 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC14.82□□□□□ -0.04
Vps35Q9EQH3 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Vps35Q9EQH3 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
Vps35Q9EQH3 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Vps35Q9EQH3 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Vps35Q9EQH3 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Vps35Q9EQH3 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC14.82□□□□□ -0.04
Vps35Q9EQH3 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Vps35Q9EQH3 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Vps35Q9EQH3 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Vps35Q9EQH3 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Vps35Q9EQH3 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vps35Q9EQH3 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vps35Q9EQH3 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vps35Q9EQH3 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Vps35Q9EQH3 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Vps35Q9EQH3 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vps35Q9EQH3 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vps35Q9EQH3 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vps35Q9EQH3 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vps35Q9EQH3 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Vps35Q9EQH3 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
Vps35Q9EQH3 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC14.81□□□□□ -0.04
Vps35Q9EQH3 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vps35Q9EQH3 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC14.81□□□□□ -0.04
Vps35Q9EQH3 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vps35Q9EQH3 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vps35Q9EQH3 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC14.81□□□□□ -0.04
Vps35Q9EQH3 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vps35Q9EQH3 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC14.81□□□□□ -0.04
Vps35Q9EQH3 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vps35Q9EQH3 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vps35Q9EQH3 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC14.81□□□□□ -0.04
Vps35Q9EQH3 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vps35Q9EQH3 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Vps35Q9EQH3 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Vps35Q9EQH3 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Vps35Q9EQH3 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vps35Q9EQH3 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Vps35Q9EQH3 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vps35Q9EQH3 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vps35Q9EQH3 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Vps35Q9EQH3 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vps35Q9EQH3 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vps35Q9EQH3 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC14.8□□□□□ -0.04
Vps35Q9EQH3 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Vps35Q9EQH3 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vps35Q9EQH3 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC14.8□□□□□ -0.04
Vps35Q9EQH3 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Vps35Q9EQH3 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Vps35Q9EQH3 Gm27301-201ENSMUST00000184012 127 ntBASIC14.8□□□□□ -0.04
Vps35Q9EQH3 Gm30437-201ENSMUST00000206086 1201 ntBASIC14.8□□□□□ -0.04
Vps35Q9EQH3 Gm45747-201ENSMUST00000212203 999 ntBASIC14.8□□□□□ -0.04
Vps35Q9EQH3 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vps35Q9EQH3 Bloc1s5-203ENSMUST00000224902 612 ntBASIC14.8□□□□□ -0.04
Vps35Q9EQH3 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vps35Q9EQH3 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vps35Q9EQH3 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC14.8□□□□□ -0.04
Vps35Q9EQH3 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vps35Q9EQH3 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vps35Q9EQH3 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vps35Q9EQH3 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vps35Q9EQH3 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Vps35Q9EQH3 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Vps35Q9EQH3 Ap5m1-205ENSMUST00000227431 3757 ntBASIC14.8□□□□□ -0.04
Vps35Q9EQH3 Camk2g-217ENSMUST00000226630 1937 ntBASIC14.8□□□□□ -0.04
Vps35Q9EQH3 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vps35Q9EQH3 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Vps35Q9EQH3 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vps35Q9EQH3 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Vps35Q9EQH3 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC14.79□□□□□ -0.04
Vps35Q9EQH3 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC14.79□□□□□ -0.04
Vps35Q9EQH3 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Vps35Q9EQH3 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vps35Q9EQH3 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC14.79□□□□□ -0.04
Vps35Q9EQH3 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vps35Q9EQH3 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC14.79□□□□□ -0.04
Vps35Q9EQH3 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC14.79□□□□□ -0.04
Vps35Q9EQH3 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC14.79□□□□□ -0.04
Vps35Q9EQH3 Gm44492-201ENSMUST00000197012 141 ntBASIC14.79□□□□□ -0.04
Vps35Q9EQH3 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vps35Q9EQH3 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC14.79□□□□□ -0.04
Vps35Q9EQH3 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Vps35Q9EQH3 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vps35Q9EQH3 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vps35Q9EQH3 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vps35Q9EQH3 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vps35Q9EQH3 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vps35Q9EQH3 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Vps35Q9EQH3 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vps35Q9EQH3 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vps35Q9EQH3 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vps35Q9EQH3 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC14.79□□□□□ -0.04
Vps35Q9EQH3 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vps35Q9EQH3 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Vps35Q9EQH3 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vps35Q9EQH3 Gm11960-202ENSMUST00000181063 2858 ntBASIC14.79□□□□□ -0.04
Vps35Q9EQH3 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Vps35Q9EQH3 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 62.1 ms