Protein–RNA interactions for Protein: Q9D701

Upk3bl1, Uroplakin-3b-like protein 1, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bl1Q9D701 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Upk3bl1Q9D701 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC13.48□□□□□ -0.25
Upk3bl1Q9D701 Gm10252-201ENSMUST00000209541 832 ntBASIC13.48□□□□□ -0.25
Upk3bl1Q9D701 Gm6991-201ENSMUST00000218475 1178 ntBASIC13.48□□□□□ -0.25
Upk3bl1Q9D701 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Upk3bl1Q9D701 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Upk3bl1Q9D701 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Upk3bl1Q9D701 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Upk3bl1Q9D701 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Upk3bl1Q9D701 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Upk3bl1Q9D701 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Upk3bl1Q9D701 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC13.48□□□□□ -0.25
Upk3bl1Q9D701 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Upk3bl1Q9D701 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Upk3bl1Q9D701 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Upk3bl1Q9D701 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Upk3bl1Q9D701 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Upk3bl1Q9D701 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Upk3bl1Q9D701 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Upk3bl1Q9D701 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC13.48□□□□□ -0.25
Upk3bl1Q9D701 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Upk3bl1Q9D701 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Upk3bl1Q9D701 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Upk3bl1Q9D701 Gm43364-201ENSMUST00000196046 3274 ntBASIC13.47□□□□□ -0.25
Upk3bl1Q9D701 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Upk3bl1Q9D701 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Upk3bl1Q9D701 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC13.47□□□□□ -0.25
Upk3bl1Q9D701 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Upk3bl1Q9D701 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Upk3bl1Q9D701 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Upk3bl1Q9D701 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Upk3bl1Q9D701 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Upk3bl1Q9D701 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC13.47□□□□□ -0.25
Upk3bl1Q9D701 Gm18101-201ENSMUST00000215769 548 ntBASIC13.47□□□□□ -0.25
Upk3bl1Q9D701 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Upk3bl1Q9D701 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Upk3bl1Q9D701 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Upk3bl1Q9D701 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Upk3bl1Q9D701 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Upk3bl1Q9D701 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Upk3bl1Q9D701 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Upk3bl1Q9D701 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC13.47□□□□□ -0.25
Upk3bl1Q9D701 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Upk3bl1Q9D701 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Upk3bl1Q9D701 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Upk3bl1Q9D701 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Upk3bl1Q9D701 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Upk3bl1Q9D701 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC13.47□□□□□ -0.25
Upk3bl1Q9D701 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Upk3bl1Q9D701 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Upk3bl1Q9D701 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Upk3bl1Q9D701 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Upk3bl1Q9D701 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Upk3bl1Q9D701 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Upk3bl1Q9D701 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Upk3bl1Q9D701 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Upk3bl1Q9D701 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Upk3bl1Q9D701 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC13.46□□□□□ -0.25
Upk3bl1Q9D701 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Upk3bl1Q9D701 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Upk3bl1Q9D701 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Upk3bl1Q9D701 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Upk3bl1Q9D701 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
Upk3bl1Q9D701 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Upk3bl1Q9D701 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Upk3bl1Q9D701 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Upk3bl1Q9D701 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Upk3bl1Q9D701 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Upk3bl1Q9D701 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Upk3bl1Q9D701 Gm1818-201ENSMUST00000169406 1184 ntBASIC13.46□□□□□ -0.25
Upk3bl1Q9D701 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Upk3bl1Q9D701 Mir6982-201ENSMUST00000184354 68 ntBASIC13.46□□□□□ -0.25
Upk3bl1Q9D701 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC13.46□□□□□ -0.25
Upk3bl1Q9D701 AC130713.1-201ENSMUST00000228853 1096 ntBASIC13.46□□□□□ -0.25
Upk3bl1Q9D701 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Upk3bl1Q9D701 Gm10313-201ENSMUST00000095320 1002 ntBASIC13.46□□□□□ -0.25
Upk3bl1Q9D701 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Upk3bl1Q9D701 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Upk3bl1Q9D701 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC13.46□□□□□ -0.25
Upk3bl1Q9D701 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC13.46□□□□□ -0.26
Upk3bl1Q9D701 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Upk3bl1Q9D701 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Upk3bl1Q9D701 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Upk3bl1Q9D701 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Upk3bl1Q9D701 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Upk3bl1Q9D701 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Upk3bl1Q9D701 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Upk3bl1Q9D701 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Upk3bl1Q9D701 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Upk3bl1Q9D701 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Upk3bl1Q9D701 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Upk3bl1Q9D701 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Upk3bl1Q9D701 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Upk3bl1Q9D701 Gm9947-201ENSMUST00000067599 2920 ntBASIC13.45□□□□□ -0.26
Upk3bl1Q9D701 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Upk3bl1Q9D701 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Upk3bl1Q9D701 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Upk3bl1Q9D701 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Upk3bl1Q9D701 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC13.45□□□□□ -0.26
Upk3bl1Q9D701 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC13.45□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms