Protein–RNA interactions for Protein: Q9CZ28

Snf8, Vacuolar-sorting protein SNF8, mousemouse

Predictions only

Length 258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snf8Q9CZ28 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC15.24■□□□□ 0.03
Snf8Q9CZ28 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Snf8Q9CZ28 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
Snf8Q9CZ28 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Snf8Q9CZ28 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Snf8Q9CZ28 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Snf8Q9CZ28 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC15.24■□□□□ 0.03
Snf8Q9CZ28 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC15.24■□□□□ 0.03
Snf8Q9CZ28 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Snf8Q9CZ28 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Snf8Q9CZ28 AC160338.1-201ENSMUST00000214232 705 ntBASIC15.24■□□□□ 0.03
Snf8Q9CZ28 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC15.24■□□□□ 0.03
Snf8Q9CZ28 AC159106.1-201ENSMUST00000224421 690 ntBASIC15.24■□□□□ 0.03
Snf8Q9CZ28 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Snf8Q9CZ28 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Snf8Q9CZ28 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Snf8Q9CZ28 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
Snf8Q9CZ28 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Snf8Q9CZ28 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Snf8Q9CZ28 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
Snf8Q9CZ28 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Snf8Q9CZ28 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Snf8Q9CZ28 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Snf8Q9CZ28 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Snf8Q9CZ28 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Snf8Q9CZ28 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Snf8Q9CZ28 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Snf8Q9CZ28 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Snf8Q9CZ28 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC15.23■□□□□ 0.03
Snf8Q9CZ28 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Snf8Q9CZ28 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Snf8Q9CZ28 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Snf8Q9CZ28 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC15.23■□□□□ 0.03
Snf8Q9CZ28 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Snf8Q9CZ28 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Snf8Q9CZ28 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Snf8Q9CZ28 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Snf8Q9CZ28 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Snf8Q9CZ28 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC15.23■□□□□ 0.03
Snf8Q9CZ28 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC15.23■□□□□ 0.03
Snf8Q9CZ28 Gm13830-205ENSMUST00000201195 1155 ntBASIC15.23■□□□□ 0.03
Snf8Q9CZ28 AC151836.1-202ENSMUST00000226259 753 ntBASIC15.23■□□□□ 0.03
Snf8Q9CZ28 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Snf8Q9CZ28 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Snf8Q9CZ28 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Snf8Q9CZ28 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Snf8Q9CZ28 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Snf8Q9CZ28 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Snf8Q9CZ28 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Snf8Q9CZ28 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Snf8Q9CZ28 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Snf8Q9CZ28 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Snf8Q9CZ28 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Snf8Q9CZ28 Gm43399-201ENSMUST00000202546 2374 ntBASIC15.22■□□□□ 0.03
Snf8Q9CZ28 Gm45546-201ENSMUST00000211053 2394 ntBASIC15.22■□□□□ 0.03
Snf8Q9CZ28 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Snf8Q9CZ28 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Snf8Q9CZ28 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Snf8Q9CZ28 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Snf8Q9CZ28 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC15.22■□□□□ 0.03
Snf8Q9CZ28 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Snf8Q9CZ28 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Snf8Q9CZ28 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Snf8Q9CZ28 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Snf8Q9CZ28 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Snf8Q9CZ28 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC15.22■□□□□ 0.03
Snf8Q9CZ28 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC15.22■□□□□ 0.03
Snf8Q9CZ28 Gm4535-201ENSMUST00000182274 558 ntBASIC15.22■□□□□ 0.03
Snf8Q9CZ28 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC15.22■□□□□ 0.03
Snf8Q9CZ28 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC15.22■□□□□ 0.03
Snf8Q9CZ28 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Snf8Q9CZ28 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Snf8Q9CZ28 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Snf8Q9CZ28 Gm10355-201ENSMUST00000097146 517 ntBASIC15.22■□□□□ 0.03
Snf8Q9CZ28 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Snf8Q9CZ28 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Snf8Q9CZ28 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC15.22■□□□□ 0.03
Snf8Q9CZ28 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Snf8Q9CZ28 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Snf8Q9CZ28 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Snf8Q9CZ28 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC15.22■□□□□ 0.03
Snf8Q9CZ28 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Snf8Q9CZ28 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC15.22■□□□□ 0.03
Snf8Q9CZ28 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Snf8Q9CZ28 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Snf8Q9CZ28 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC15.21■□□□□ 0.03
Snf8Q9CZ28 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Snf8Q9CZ28 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Snf8Q9CZ28 Gm44291-201ENSMUST00000203102 2865 ntBASIC15.21■□□□□ 0.03
Snf8Q9CZ28 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC15.21■□□□□ 0.03
Snf8Q9CZ28 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Snf8Q9CZ28 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Snf8Q9CZ28 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Snf8Q9CZ28 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC15.21■□□□□ 0.03
Snf8Q9CZ28 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC15.21■□□□□ 0.03
Snf8Q9CZ28 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Snf8Q9CZ28 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Snf8Q9CZ28 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Snf8Q9CZ28 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Snf8Q9CZ28 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms