Protein–RNA interactions for Protein: Q9CSV6

Sft2d3, Vesicle transport protein SFT2C, mousemouse

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sft2d3Q9CSV6 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Sft2d3Q9CSV6 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Sft2d3Q9CSV6 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
Sft2d3Q9CSV6 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sft2d3Q9CSV6 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sft2d3Q9CSV6 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sft2d3Q9CSV6 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sft2d3Q9CSV6 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC12.64□□□□□ -0.39
Sft2d3Q9CSV6 Gm5366-201ENSMUST00000215494 1338 ntBASIC12.64□□□□□ -0.39
Sft2d3Q9CSV6 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sft2d3Q9CSV6 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC12.64□□□□□ -0.39
Sft2d3Q9CSV6 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sft2d3Q9CSV6 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sft2d3Q9CSV6 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Sft2d3Q9CSV6 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sft2d3Q9CSV6 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Sft2d3Q9CSV6 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sft2d3Q9CSV6 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC12.64□□□□□ -0.39
Sft2d3Q9CSV6 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sft2d3Q9CSV6 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Sft2d3Q9CSV6 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC12.64□□□□□ -0.39
Sft2d3Q9CSV6 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC12.64□□□□□ -0.39
Sft2d3Q9CSV6 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sft2d3Q9CSV6 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sft2d3Q9CSV6 Mir7036b-201ENSMUST00000184791 63 ntBASIC12.64□□□□□ -0.39
Sft2d3Q9CSV6 Gm43575-201ENSMUST00000196420 516 ntBASIC12.64□□□□□ -0.39
Sft2d3Q9CSV6 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Sft2d3Q9CSV6 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC12.64□□□□□ -0.39
Sft2d3Q9CSV6 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sft2d3Q9CSV6 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sft2d3Q9CSV6 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sft2d3Q9CSV6 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sft2d3Q9CSV6 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sft2d3Q9CSV6 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sft2d3Q9CSV6 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Sft2d3Q9CSV6 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sft2d3Q9CSV6 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sft2d3Q9CSV6 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sft2d3Q9CSV6 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Sft2d3Q9CSV6 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Sft2d3Q9CSV6 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sft2d3Q9CSV6 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sft2d3Q9CSV6 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
Sft2d3Q9CSV6 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sft2d3Q9CSV6 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sft2d3Q9CSV6 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sft2d3Q9CSV6 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sft2d3Q9CSV6 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
Sft2d3Q9CSV6 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sft2d3Q9CSV6 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sft2d3Q9CSV6 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Sft2d3Q9CSV6 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Sft2d3Q9CSV6 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
Sft2d3Q9CSV6 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sft2d3Q9CSV6 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sft2d3Q9CSV6 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC12.63□□□□□ -0.39
Sft2d3Q9CSV6 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sft2d3Q9CSV6 Gm4913-201ENSMUST00000117075 1290 ntBASIC12.63□□□□□ -0.39
Sft2d3Q9CSV6 Gm11453-201ENSMUST00000117318 1007 ntBASIC12.63□□□□□ -0.39
Sft2d3Q9CSV6 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sft2d3Q9CSV6 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC12.63□□□□□ -0.39
Sft2d3Q9CSV6 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC12.63□□□□□ -0.39
Sft2d3Q9CSV6 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sft2d3Q9CSV6 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sft2d3Q9CSV6 Gm10175-201ENSMUST00000086013 645 ntBASIC12.63□□□□□ -0.39
Sft2d3Q9CSV6 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sft2d3Q9CSV6 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sft2d3Q9CSV6 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sft2d3Q9CSV6 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Sft2d3Q9CSV6 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Sft2d3Q9CSV6 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sft2d3Q9CSV6 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sft2d3Q9CSV6 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sft2d3Q9CSV6 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sft2d3Q9CSV6 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Sft2d3Q9CSV6 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sft2d3Q9CSV6 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sft2d3Q9CSV6 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Sft2d3Q9CSV6 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sft2d3Q9CSV6 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sft2d3Q9CSV6 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sft2d3Q9CSV6 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sft2d3Q9CSV6 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sft2d3Q9CSV6 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sft2d3Q9CSV6 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sft2d3Q9CSV6 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Sft2d3Q9CSV6 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sft2d3Q9CSV6 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sft2d3Q9CSV6 Gm7669-201ENSMUST00000210184 1603 ntBASIC12.62□□□□□ -0.39
Sft2d3Q9CSV6 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sft2d3Q9CSV6 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sft2d3Q9CSV6 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Sft2d3Q9CSV6 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Sft2d3Q9CSV6 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sft2d3Q9CSV6 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sft2d3Q9CSV6 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sft2d3Q9CSV6 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sft2d3Q9CSV6 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sft2d3Q9CSV6 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sft2d3Q9CSV6 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms