Protein–RNA interactions for Protein: Q9CQU3

Rer1, Protein RER1, mousemouse

Known RBP Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rer1Q9CQU3 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Rer1Q9CQU3 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Rer1Q9CQU3 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rer1Q9CQU3 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rer1Q9CQU3 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Rer1Q9CQU3 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Rer1Q9CQU3 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Rer1Q9CQU3 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rer1Q9CQU3 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Rer1Q9CQU3 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC12.12□□□□□ -0.47
Rer1Q9CQU3 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rer1Q9CQU3 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rer1Q9CQU3 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rer1Q9CQU3 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rer1Q9CQU3 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rer1Q9CQU3 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rer1Q9CQU3 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Rer1Q9CQU3 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Rer1Q9CQU3 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC12.12□□□□□ -0.47
Rer1Q9CQU3 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Rer1Q9CQU3 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Rer1Q9CQU3 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC12.12□□□□□ -0.47
Rer1Q9CQU3 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC12.12□□□□□ -0.47
Rer1Q9CQU3 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC12.12□□□□□ -0.47
Rer1Q9CQU3 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rer1Q9CQU3 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rer1Q9CQU3 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rer1Q9CQU3 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rer1Q9CQU3 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
Rer1Q9CQU3 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Rer1Q9CQU3 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Rer1Q9CQU3 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rer1Q9CQU3 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC12.12□□□□□ -0.47
Rer1Q9CQU3 Gm43509-201ENSMUST00000196551 2594 ntBASIC12.12□□□□□ -0.47
Rer1Q9CQU3 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC12.12□□□□□ -0.47
Rer1Q9CQU3 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rer1Q9CQU3 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rer1Q9CQU3 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Rer1Q9CQU3 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Rer1Q9CQU3 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rer1Q9CQU3 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Rer1Q9CQU3 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC12.11□□□□□ -0.47
Rer1Q9CQU3 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC12.11□□□□□ -0.47
Rer1Q9CQU3 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rer1Q9CQU3 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rer1Q9CQU3 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rer1Q9CQU3 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rer1Q9CQU3 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Rer1Q9CQU3 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rer1Q9CQU3 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rer1Q9CQU3 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC12.11□□□□□ -0.47
Rer1Q9CQU3 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Rer1Q9CQU3 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rer1Q9CQU3 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rer1Q9CQU3 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rer1Q9CQU3 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC12.11□□□□□ -0.47
Rer1Q9CQU3 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC12.11□□□□□ -0.47
Rer1Q9CQU3 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC12.11□□□□□ -0.47
Rer1Q9CQU3 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Rer1Q9CQU3 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Rer1Q9CQU3 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC12.11□□□□□ -0.47
Rer1Q9CQU3 AC147366.1-201ENSMUST00000227671 852 ntBASIC12.11□□□□□ -0.47
Rer1Q9CQU3 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rer1Q9CQU3 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rer1Q9CQU3 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rer1Q9CQU3 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Rer1Q9CQU3 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rer1Q9CQU3 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC12.11□□□□□ -0.47
Rer1Q9CQU3 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Rer1Q9CQU3 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rer1Q9CQU3 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rer1Q9CQU3 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Rer1Q9CQU3 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Rer1Q9CQU3 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rer1Q9CQU3 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Rer1Q9CQU3 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
Rer1Q9CQU3 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
Rer1Q9CQU3 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rer1Q9CQU3 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Rer1Q9CQU3 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rer1Q9CQU3 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Rer1Q9CQU3 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rer1Q9CQU3 Gm12620-201ENSMUST00000119791 1986 ntBASIC12.1□□□□□ -0.47
Rer1Q9CQU3 Gm12612-201ENSMUST00000140182 1986 ntBASIC12.1□□□□□ -0.47
Rer1Q9CQU3 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rer1Q9CQU3 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rer1Q9CQU3 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Rer1Q9CQU3 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rer1Q9CQU3 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rer1Q9CQU3 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rer1Q9CQU3 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rer1Q9CQU3 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rer1Q9CQU3 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC12.1□□□□□ -0.47
Rer1Q9CQU3 Carlr-201ENSMUST00000181515 2574 ntBASIC12.1□□□□□ -0.47
Rer1Q9CQU3 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rer1Q9CQU3 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rer1Q9CQU3 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Rer1Q9CQU3 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Rer1Q9CQU3 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Rer1Q9CQU3 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 54.3 ms