Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trim33Q99PP7 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trim33Q99PP7 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trim33Q99PP7 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trim33Q99PP7 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trim33Q99PP7 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC14.69□□□□□ -0.06
Trim33Q99PP7 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trim33Q99PP7 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC14.68□□□□□ -0.06
Trim33Q99PP7 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC14.68□□□□□ -0.06
Trim33Q99PP7 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim33Q99PP7 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Trim33Q99PP7 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim33Q99PP7 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim33Q99PP7 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim33Q99PP7 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
Trim33Q99PP7 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC14.68□□□□□ -0.06
Trim33Q99PP7 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim33Q99PP7 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trim33Q99PP7 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Trim33Q99PP7 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim33Q99PP7 Gm11779-201ENSMUST00000118541 368 ntBASIC14.68□□□□□ -0.06
Trim33Q99PP7 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC14.68□□□□□ -0.06
Trim33Q99PP7 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.06
Trim33Q99PP7 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC14.68□□□□□ -0.06
Trim33Q99PP7 AC153961.1-201ENSMUST00000217760 385 ntBASIC14.68□□□□□ -0.06
Trim33Q99PP7 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Trim33Q99PP7 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim33Q99PP7 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Trim33Q99PP7 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim33Q99PP7 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim33Q99PP7 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim33Q99PP7 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC14.68□□□□□ -0.06
Trim33Q99PP7 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trim33Q99PP7 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trim33Q99PP7 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trim33Q99PP7 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim33Q99PP7 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim33Q99PP7 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim33Q99PP7 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim33Q99PP7 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim33Q99PP7 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC14.67□□□□□ -0.06
Trim33Q99PP7 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Trim33Q99PP7 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim33Q99PP7 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trim33Q99PP7 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim33Q99PP7 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim33Q99PP7 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Trim33Q99PP7 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim33Q99PP7 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim33Q99PP7 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim33Q99PP7 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Trim33Q99PP7 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
Trim33Q99PP7 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim33Q99PP7 Gm12008-201ENSMUST00000117791 755 ntBASIC14.67□□□□□ -0.06
Trim33Q99PP7 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim33Q99PP7 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim33Q99PP7 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim33Q99PP7 Gm7229-201ENSMUST00000214719 1007 ntBASIC14.67□□□□□ -0.06
Trim33Q99PP7 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim33Q99PP7 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim33Q99PP7 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC14.67□□□□□ -0.06
Trim33Q99PP7 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim33Q99PP7 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim33Q99PP7 AC025913.2-201ENSMUST00000220136 1766 ntBASIC14.67□□□□□ -0.06
Trim33Q99PP7 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Trim33Q99PP7 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trim33Q99PP7 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC14.67□□□□□ -0.06
Trim33Q99PP7 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trim33Q99PP7 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Trim33Q99PP7 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trim33Q99PP7 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trim33Q99PP7 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim33Q99PP7 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim33Q99PP7 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim33Q99PP7 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim33Q99PP7 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trim33Q99PP7 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC14.66□□□□□ -0.06
Trim33Q99PP7 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim33Q99PP7 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC14.66□□□□□ -0.06
Trim33Q99PP7 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trim33Q99PP7 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC14.66□□□□□ -0.06
Trim33Q99PP7 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC14.66□□□□□ -0.06
Trim33Q99PP7 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trim33Q99PP7 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC14.66□□□□□ -0.06
Trim33Q99PP7 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC14.66□□□□□ -0.06
Trim33Q99PP7 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim33Q99PP7 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC14.66□□□□□ -0.06
Trim33Q99PP7 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC14.66□□□□□ -0.06
Trim33Q99PP7 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Trim33Q99PP7 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim33Q99PP7 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim33Q99PP7 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
Trim33Q99PP7 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim33Q99PP7 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim33Q99PP7 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim33Q99PP7 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Trim33Q99PP7 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim33Q99PP7 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trim33Q99PP7 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC14.66□□□□□ -0.06
Trim33Q99PP7 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms