Protein–RNA interactions for Protein: Q99PJ1

Pcdh15, Protocadherin-15, mousemouse

Predictions only

Length 1,943 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15Q99PJ1 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdh15Q99PJ1 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdh15Q99PJ1 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdh15Q99PJ1 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Pcdh15Q99PJ1 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdh15Q99PJ1 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdh15Q99PJ1 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdh15Q99PJ1 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdh15Q99PJ1 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC16.42■□□□□ 0.22
Pcdh15Q99PJ1 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdh15Q99PJ1 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdh15Q99PJ1 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdh15Q99PJ1 Gm16177-201ENSMUST00000120728 718 ntBASIC16.42■□□□□ 0.22
Pcdh15Q99PJ1 Mir3547-201ENSMUST00000175461 88 ntBASIC16.42■□□□□ 0.22
Pcdh15Q99PJ1 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC16.42■□□□□ 0.22
Pcdh15Q99PJ1 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC16.42■□□□□ 0.22
Pcdh15Q99PJ1 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdh15Q99PJ1 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdh15Q99PJ1 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdh15Q99PJ1 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdh15Q99PJ1 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdh15Q99PJ1 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC16.42■□□□□ 0.22
Pcdh15Q99PJ1 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdh15Q99PJ1 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdh15Q99PJ1 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdh15Q99PJ1 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdh15Q99PJ1 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdh15Q99PJ1 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdh15Q99PJ1 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdh15Q99PJ1 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC16.41■□□□□ 0.22
Pcdh15Q99PJ1 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC16.41■□□□□ 0.22
Pcdh15Q99PJ1 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdh15Q99PJ1 Ighv8-14-201ENSMUST00000196781 358 ntBASIC16.41■□□□□ 0.22
Pcdh15Q99PJ1 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdh15Q99PJ1 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdh15Q99PJ1 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdh15Q99PJ1 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdh15Q99PJ1 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdh15Q99PJ1 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Pcdh15Q99PJ1 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdh15Q99PJ1 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC16.41■□□□□ 0.22
Pcdh15Q99PJ1 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
Pcdh15Q99PJ1 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
Pcdh15Q99PJ1 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdh15Q99PJ1 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdh15Q99PJ1 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdh15Q99PJ1 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdh15Q99PJ1 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
Pcdh15Q99PJ1 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdh15Q99PJ1 Gm27243-201ENSMUST00000183964 521 ntBASIC16.41■□□□□ 0.22
Pcdh15Q99PJ1 Gm43758-201ENSMUST00000199500 367 ntBASIC16.41■□□□□ 0.22
Pcdh15Q99PJ1 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC16.41■□□□□ 0.22
Pcdh15Q99PJ1 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdh15Q99PJ1 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Pcdh15Q99PJ1 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdh15Q99PJ1 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdh15Q99PJ1 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdh15Q99PJ1 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC16.4■□□□□ 0.22
Pcdh15Q99PJ1 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC16.4■□□□□ 0.22
Pcdh15Q99PJ1 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdh15Q99PJ1 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdh15Q99PJ1 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdh15Q99PJ1 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdh15Q99PJ1 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdh15Q99PJ1 Gm8801-201ENSMUST00000173255 1064 ntBASIC16.4■□□□□ 0.22
Pcdh15Q99PJ1 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC16.4■□□□□ 0.22
Pcdh15Q99PJ1 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdh15Q99PJ1 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdh15Q99PJ1 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdh15Q99PJ1 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdh15Q99PJ1 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdh15Q99PJ1 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdh15Q99PJ1 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdh15Q99PJ1 Gm12485-201ENSMUST00000119641 291 ntBASIC16.39■□□□□ 0.21
Pcdh15Q99PJ1 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdh15Q99PJ1 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC16.39■□□□□ 0.21
Pcdh15Q99PJ1 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC16.39■□□□□ 0.21
Pcdh15Q99PJ1 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Pcdh15Q99PJ1 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdh15Q99PJ1 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC16.39■□□□□ 0.21
Pcdh15Q99PJ1 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdh15Q99PJ1 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdh15Q99PJ1 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdh15Q99PJ1 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC16.39■□□□□ 0.21
Pcdh15Q99PJ1 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdh15Q99PJ1 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdh15Q99PJ1 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdh15Q99PJ1 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdh15Q99PJ1 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdh15Q99PJ1 Gm29649-201ENSMUST00000185649 419 ntBASIC16.39■□□□□ 0.21
Pcdh15Q99PJ1 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC16.39■□□□□ 0.21
Pcdh15Q99PJ1 Gm18934-201ENSMUST00000216671 1044 ntBASIC16.39■□□□□ 0.21
Pcdh15Q99PJ1 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdh15Q99PJ1 Gm17383-201ENSMUST00000078739 1041 ntBASIC16.39■□□□□ 0.21
Pcdh15Q99PJ1 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdh15Q99PJ1 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdh15Q99PJ1 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC16.39■□□□□ 0.21
Pcdh15Q99PJ1 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdh15Q99PJ1 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Pcdh15Q99PJ1 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms