Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC14.83□□□□□ -0.04
Cdh23Q99PF4 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Cdh23Q99PF4 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cdh23Q99PF4 Tfap2a-203ENSMUST00000223869 2037 ntBASIC14.83□□□□□ -0.04
Cdh23Q99PF4 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cdh23Q99PF4 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cdh23Q99PF4 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC14.83□□□□□ -0.04
Cdh23Q99PF4 Gm19309-201ENSMUST00000218295 205 ntBASIC14.83□□□□□ -0.04
Cdh23Q99PF4 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cdh23Q99PF4 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cdh23Q99PF4 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cdh23Q99PF4 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
Cdh23Q99PF4 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Cdh23Q99PF4 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC14.82□□□□□ -0.04
Cdh23Q99PF4 Gm29199-201ENSMUST00000187766 775 ntBASIC14.82□□□□□ -0.04
Cdh23Q99PF4 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Cdh23Q99PF4 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cdh23Q99PF4 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cdh23Q99PF4 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cdh23Q99PF4 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cdh23Q99PF4 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cdh23Q99PF4 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Cdh23Q99PF4 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
Cdh23Q99PF4 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cdh23Q99PF4 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
Cdh23Q99PF4 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC14.82□□□□□ -0.04
Cdh23Q99PF4 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC14.82□□□□□ -0.04
Cdh23Q99PF4 Gm6013-201ENSMUST00000212264 699 ntBASIC14.82□□□□□ -0.04
Cdh23Q99PF4 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cdh23Q99PF4 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cdh23Q99PF4 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cdh23Q99PF4 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cdh23Q99PF4 Gm42473-201ENSMUST00000201056 2291 ntBASIC14.82□□□□□ -0.04
Cdh23Q99PF4 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cdh23Q99PF4 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC14.82□□□□□ -0.04
Cdh23Q99PF4 Gm42791-202ENSMUST00000147473 727 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Cdh23Q99PF4 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC14.82□□□□□ -0.04
Cdh23Q99PF4 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC14.82□□□□□ -0.04
Cdh23Q99PF4 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC14.82□□□□□ -0.04
Cdh23Q99PF4 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cdh23Q99PF4 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Cdh23Q99PF4 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC14.81□□□□□ -0.04
Cdh23Q99PF4 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Cdh23Q99PF4 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Cdh23Q99PF4 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC14.81□□□□□ -0.04
Cdh23Q99PF4 Gm42442-201ENSMUST00000197951 1133 ntBASIC14.81□□□□□ -0.04
Cdh23Q99PF4 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC14.81□□□□□ -0.04
Cdh23Q99PF4 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cdh23Q99PF4 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Cdh23Q99PF4 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cdh23Q99PF4 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cdh23Q99PF4 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Cdh23Q99PF4 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC14.81□□□□□ -0.04
Cdh23Q99PF4 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cdh23Q99PF4 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cdh23Q99PF4 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC14.81□□□□□ -0.04
Cdh23Q99PF4 Gm26083-201ENSMUST00000157904 193 ntBASIC14.81□□□□□ -0.04
Cdh23Q99PF4 Gm5370-201ENSMUST00000187187 574 ntBASIC14.81□□□□□ -0.04
Cdh23Q99PF4 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
Cdh23Q99PF4 AC155637.1-201ENSMUST00000218560 636 ntBASIC14.81□□□□□ -0.04
Cdh23Q99PF4 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC14.81□□□□□ -0.04
Cdh23Q99PF4 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cdh23Q99PF4 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cdh23Q99PF4 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cdh23Q99PF4 Gm7556-201ENSMUST00000201178 1084 ntBASIC14.81□□□□□ -0.04
Cdh23Q99PF4 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cdh23Q99PF4 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cdh23Q99PF4 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cdh23Q99PF4 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cdh23Q99PF4 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cdh23Q99PF4 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cdh23Q99PF4 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC14.8□□□□□ -0.04
Cdh23Q99PF4 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Cdh23Q99PF4 Gm40466-201ENSMUST00000212174 422 ntBASIC14.8□□□□□ -0.04
Cdh23Q99PF4 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cdh23Q99PF4 Gm13050-201ENSMUST00000122149 1345 ntBASIC14.8□□□□□ -0.04
Cdh23Q99PF4 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cdh23Q99PF4 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Cdh23Q99PF4 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Cdh23Q99PF4 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC14.8□□□□□ -0.04
Cdh23Q99PF4 Gm7783-201ENSMUST00000204795 781 ntBASIC14.8□□□□□ -0.04
Cdh23Q99PF4 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cdh23Q99PF4 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Cdh23Q99PF4 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cdh23Q99PF4 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC14.8□□□□□ -0.04
Cdh23Q99PF4 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cdh23Q99PF4 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cdh23Q99PF4 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cdh23Q99PF4 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Cdh23Q99PF4 Gm19430-201ENSMUST00000193847 2137 ntBASIC14.79□□□□□ -0.04
Cdh23Q99PF4 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cdh23Q99PF4 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cdh23Q99PF4 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cdh23Q99PF4 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cdh23Q99PF4 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC14.79□□□□□ -0.04
Cdh23Q99PF4 Gm9816-201ENSMUST00000122292 1414 ntBASIC14.79□□□□□ -0.04
Cdh23Q99PF4 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Cdh23Q99PF4 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Cdh23Q99PF4 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC14.79□□□□□ -0.04
Cdh23Q99PF4 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms