Protein–RNA interactions for Protein: Q99LM2

Cdk5rap3, CDK5 regulatory subunit-associated protein 3, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap3Q99LM2 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Cdk5rap3Q99LM2 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Cdk5rap3Q99LM2 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cdk5rap3Q99LM2 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Cdk5rap3Q99LM2 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cdk5rap3Q99LM2 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cdk5rap3Q99LM2 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cdk5rap3Q99LM2 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Cdk5rap3Q99LM2 Gm18856-201ENSMUST00000178096 1374 ntBASIC15.34■□□□□ 0.05
Cdk5rap3Q99LM2 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cdk5rap3Q99LM2 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cdk5rap3Q99LM2 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC15.34■□□□□ 0.05
Cdk5rap3Q99LM2 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cdk5rap3Q99LM2 Gm10710-201ENSMUST00000047876 3971 ntBASIC15.34■□□□□ 0.05
Cdk5rap3Q99LM2 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.05
Cdk5rap3Q99LM2 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC15.33■□□□□ 0.05
Cdk5rap3Q99LM2 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Cdk5rap3Q99LM2 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Cdk5rap3Q99LM2 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Cdk5rap3Q99LM2 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Cdk5rap3Q99LM2 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC15.33■□□□□ 0.05
Cdk5rap3Q99LM2 Gm43205-201ENSMUST00000198622 1968 ntBASIC15.33■□□□□ 0.05
Cdk5rap3Q99LM2 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC15.33■□□□□ 0.04
Cdk5rap3Q99LM2 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Cdk5rap3Q99LM2 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC15.33■□□□□ 0.04
Cdk5rap3Q99LM2 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Cdk5rap3Q99LM2 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cdk5rap3Q99LM2 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Cdk5rap3Q99LM2 Gm44645-201ENSMUST00000205492 1653 ntBASIC15.33■□□□□ 0.04
Cdk5rap3Q99LM2 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cdk5rap3Q99LM2 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Cdk5rap3Q99LM2 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cdk5rap3Q99LM2 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cdk5rap3Q99LM2 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC15.33■□□□□ 0.04
Cdk5rap3Q99LM2 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Cdk5rap3Q99LM2 Gm27459-201ENSMUST00000184860 107 ntBASIC15.33■□□□□ 0.04
Cdk5rap3Q99LM2 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
Cdk5rap3Q99LM2 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC15.33■□□□□ 0.04
Cdk5rap3Q99LM2 CT010506.4-201ENSMUST00000225457 351 ntBASIC15.33■□□□□ 0.04
Cdk5rap3Q99LM2 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cdk5rap3Q99LM2 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cdk5rap3Q99LM2 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cdk5rap3Q99LM2 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC15.33■□□□□ 0.04
Cdk5rap3Q99LM2 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Cdk5rap3Q99LM2 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cdk5rap3Q99LM2 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Cdk5rap3Q99LM2 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cdk5rap3Q99LM2 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cdk5rap3Q99LM2 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Cdk5rap3Q99LM2 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cdk5rap3Q99LM2 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cdk5rap3Q99LM2 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Cdk5rap3Q99LM2 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cdk5rap3Q99LM2 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Cdk5rap3Q99LM2 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
Cdk5rap3Q99LM2 AC130669.1-201ENSMUST00000228537 1672 ntBASIC15.32■□□□□ 0.04
Cdk5rap3Q99LM2 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cdk5rap3Q99LM2 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cdk5rap3Q99LM2 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cdk5rap3Q99LM2 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cdk5rap3Q99LM2 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cdk5rap3Q99LM2 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cdk5rap3Q99LM2 Gm11764-201ENSMUST00000120221 623 ntBASIC15.32■□□□□ 0.04
Cdk5rap3Q99LM2 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC15.32■□□□□ 0.04
Cdk5rap3Q99LM2 Gm7977-201ENSMUST00000193787 748 ntBASIC15.32■□□□□ 0.04
Cdk5rap3Q99LM2 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC15.32■□□□□ 0.04
Cdk5rap3Q99LM2 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Cdk5rap3Q99LM2 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Cdk5rap3Q99LM2 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cdk5rap3Q99LM2 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cdk5rap3Q99LM2 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC15.32■□□□□ 0.04
Cdk5rap3Q99LM2 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cdk5rap3Q99LM2 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cdk5rap3Q99LM2 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cdk5rap3Q99LM2 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Cdk5rap3Q99LM2 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cdk5rap3Q99LM2 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cdk5rap3Q99LM2 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cdk5rap3Q99LM2 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cdk5rap3Q99LM2 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cdk5rap3Q99LM2 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cdk5rap3Q99LM2 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
Cdk5rap3Q99LM2 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
Cdk5rap3Q99LM2 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cdk5rap3Q99LM2 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC15.31■□□□□ 0.04
Cdk5rap3Q99LM2 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cdk5rap3Q99LM2 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Cdk5rap3Q99LM2 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Cdk5rap3Q99LM2 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cdk5rap3Q99LM2 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Cdk5rap3Q99LM2 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC15.31■□□□□ 0.04
Cdk5rap3Q99LM2 Gm6376-201ENSMUST00000209407 580 ntBASIC15.31■□□□□ 0.04
Cdk5rap3Q99LM2 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Cdk5rap3Q99LM2 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cdk5rap3Q99LM2 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Cdk5rap3Q99LM2 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Cdk5rap3Q99LM2 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cdk5rap3Q99LM2 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC15.31■□□□□ 0.04
Cdk5rap3Q99LM2 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Cdk5rap3Q99LM2 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms