Protein–RNA interactions for Protein: Q99J36

Thumpd1, THUMP domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd1Q99J36 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Thumpd1Q99J36 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Thumpd1Q99J36 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Thumpd1Q99J36 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Thumpd1Q99J36 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Thumpd1Q99J36 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Thumpd1Q99J36 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Thumpd1Q99J36 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
Thumpd1Q99J36 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Thumpd1Q99J36 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Thumpd1Q99J36 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Thumpd1Q99J36 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Thumpd1Q99J36 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Thumpd1Q99J36 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Thumpd1Q99J36 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Thumpd1Q99J36 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC13.19□□□□□ -0.3
Thumpd1Q99J36 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Thumpd1Q99J36 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Thumpd1Q99J36 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Thumpd1Q99J36 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Thumpd1Q99J36 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Thumpd1Q99J36 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Thumpd1Q99J36 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Thumpd1Q99J36 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Thumpd1Q99J36 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Thumpd1Q99J36 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC13.18□□□□□ -0.3
Thumpd1Q99J36 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Thumpd1Q99J36 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Thumpd1Q99J36 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Thumpd1Q99J36 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Thumpd1Q99J36 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Thumpd1Q99J36 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC13.18□□□□□ -0.3
Thumpd1Q99J36 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Thumpd1Q99J36 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Thumpd1Q99J36 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Thumpd1Q99J36 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Thumpd1Q99J36 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Thumpd1Q99J36 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Thumpd1Q99J36 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Thumpd1Q99J36 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Thumpd1Q99J36 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC13.18□□□□□ -0.3
Thumpd1Q99J36 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Thumpd1Q99J36 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Thumpd1Q99J36 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC13.18□□□□□ -0.3
Thumpd1Q99J36 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Thumpd1Q99J36 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
Thumpd1Q99J36 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC13.18□□□□□ -0.3
Thumpd1Q99J36 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC13.18□□□□□ -0.3
Thumpd1Q99J36 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Thumpd1Q99J36 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Thumpd1Q99J36 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Thumpd1Q99J36 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Thumpd1Q99J36 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Thumpd1Q99J36 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Thumpd1Q99J36 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Thumpd1Q99J36 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Thumpd1Q99J36 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Thumpd1Q99J36 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Thumpd1Q99J36 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC13.18□□□□□ -0.3
Thumpd1Q99J36 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Thumpd1Q99J36 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Thumpd1Q99J36 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Thumpd1Q99J36 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Thumpd1Q99J36 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Thumpd1Q99J36 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Thumpd1Q99J36 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
Thumpd1Q99J36 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Thumpd1Q99J36 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC13.17□□□□□ -0.3
Thumpd1Q99J36 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Thumpd1Q99J36 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Thumpd1Q99J36 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Thumpd1Q99J36 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Thumpd1Q99J36 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC13.17□□□□□ -0.3
Thumpd1Q99J36 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Thumpd1Q99J36 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Thumpd1Q99J36 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Thumpd1Q99J36 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Thumpd1Q99J36 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Thumpd1Q99J36 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Thumpd1Q99J36 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC13.17□□□□□ -0.3
Thumpd1Q99J36 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Thumpd1Q99J36 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Thumpd1Q99J36 AA414768-201ENSMUST00000121924 1257 ntBASIC13.17□□□□□ -0.3
Thumpd1Q99J36 Gm23634-201ENSMUST00000175071 91 ntBASIC13.17□□□□□ -0.3
Thumpd1Q99J36 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
Thumpd1Q99J36 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC13.17□□□□□ -0.3
Thumpd1Q99J36 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Thumpd1Q99J36 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Thumpd1Q99J36 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC13.17□□□□□ -0.3
Thumpd1Q99J36 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Thumpd1Q99J36 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Thumpd1Q99J36 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Thumpd1Q99J36 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Thumpd1Q99J36 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC13.17□□□□□ -0.3
Thumpd1Q99J36 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Thumpd1Q99J36 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Thumpd1Q99J36 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Thumpd1Q99J36 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Thumpd1Q99J36 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Thumpd1Q99J36 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms