Protein–RNA interactions for Protein: Q91XZ5

Pcdhb5, Protocadherin beta 5, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb5Q91XZ5 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC17.37■□□□□ 0.37
Pcdhb5Q91XZ5 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhb5Q91XZ5 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC17.37■□□□□ 0.37
Pcdhb5Q91XZ5 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
Pcdhb5Q91XZ5 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhb5Q91XZ5 Cd63-ps-201ENSMUST00000145417 875 ntBASIC17.37■□□□□ 0.37
Pcdhb5Q91XZ5 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC17.37■□□□□ 0.37
Pcdhb5Q91XZ5 Gm27631-201ENSMUST00000184163 466 ntBASIC17.37■□□□□ 0.37
Pcdhb5Q91XZ5 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhb5Q91XZ5 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Pcdhb5Q91XZ5 Gm16476-201ENSMUST00000221544 139 ntBASIC17.37■□□□□ 0.37
Pcdhb5Q91XZ5 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhb5Q91XZ5 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhb5Q91XZ5 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhb5Q91XZ5 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhb5Q91XZ5 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhb5Q91XZ5 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhb5Q91XZ5 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhb5Q91XZ5 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Pcdhb5Q91XZ5 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhb5Q91XZ5 Gm3365-201ENSMUST00000216296 1480 ntBASIC17.37■□□□□ 0.37
Pcdhb5Q91XZ5 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pcdhb5Q91XZ5 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhb5Q91XZ5 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhb5Q91XZ5 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC17.36■□□□□ 0.37
Pcdhb5Q91XZ5 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhb5Q91XZ5 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC17.36■□□□□ 0.37
Pcdhb5Q91XZ5 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhb5Q91XZ5 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
Pcdhb5Q91XZ5 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhb5Q91XZ5 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhb5Q91XZ5 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Pcdhb5Q91XZ5 Gm15653-201ENSMUST00000119247 907 ntBASIC17.36■□□□□ 0.37
Pcdhb5Q91XZ5 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC17.36■□□□□ 0.37
Pcdhb5Q91XZ5 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC17.36■□□□□ 0.37
Pcdhb5Q91XZ5 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC17.36■□□□□ 0.37
Pcdhb5Q91XZ5 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhb5Q91XZ5 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC17.36■□□□□ 0.37
Pcdhb5Q91XZ5 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC17.36■□□□□ 0.37
Pcdhb5Q91XZ5 Gm9182-201ENSMUST00000217829 639 ntBASIC17.36■□□□□ 0.37
Pcdhb5Q91XZ5 Gm46209-201ENSMUST00000217912 553 ntBASIC17.36■□□□□ 0.37
Pcdhb5Q91XZ5 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhb5Q91XZ5 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhb5Q91XZ5 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhb5Q91XZ5 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
Pcdhb5Q91XZ5 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhb5Q91XZ5 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhb5Q91XZ5 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhb5Q91XZ5 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhb5Q91XZ5 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhb5Q91XZ5 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhb5Q91XZ5 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhb5Q91XZ5 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhb5Q91XZ5 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhb5Q91XZ5 Gm21009-201ENSMUST00000197169 1669 ntBASIC17.36■□□□□ 0.37
Pcdhb5Q91XZ5 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhb5Q91XZ5 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Pcdhb5Q91XZ5 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Pcdhb5Q91XZ5 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhb5Q91XZ5 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Pcdhb5Q91XZ5 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhb5Q91XZ5 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhb5Q91XZ5 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhb5Q91XZ5 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhb5Q91XZ5 Gm9726-201ENSMUST00000180321 678 ntBASIC17.35■□□□□ 0.37
Pcdhb5Q91XZ5 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhb5Q91XZ5 Gm30437-201ENSMUST00000206086 1201 ntBASIC17.35■□□□□ 0.37
Pcdhb5Q91XZ5 Dupd1-202ENSMUST00000224735 548 ntBASIC17.35■□□□□ 0.37
Pcdhb5Q91XZ5 AC238811.1-201ENSMUST00000225302 441 ntBASIC17.35■□□□□ 0.37
Pcdhb5Q91XZ5 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhb5Q91XZ5 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhb5Q91XZ5 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhb5Q91XZ5 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhb5Q91XZ5 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhb5Q91XZ5 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Pcdhb5Q91XZ5 Gm44616-201ENSMUST00000206417 1732 ntBASIC17.35■□□□□ 0.37
Pcdhb5Q91XZ5 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhb5Q91XZ5 Tfap2a-203ENSMUST00000223869 2037 ntBASIC17.35■□□□□ 0.37
Pcdhb5Q91XZ5 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhb5Q91XZ5 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhb5Q91XZ5 Gm43352-201ENSMUST00000196419 3065 ntBASIC17.34■□□□□ 0.37
Pcdhb5Q91XZ5 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhb5Q91XZ5 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC17.34■□□□□ 0.37
Pcdhb5Q91XZ5 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC17.34■□□□□ 0.37
Pcdhb5Q91XZ5 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhb5Q91XZ5 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Pcdhb5Q91XZ5 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhb5Q91XZ5 Gm15321-201ENSMUST00000121290 288 ntBASIC17.34■□□□□ 0.37
Pcdhb5Q91XZ5 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC17.34■□□□□ 0.37
Pcdhb5Q91XZ5 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC17.34■□□□□ 0.37
Pcdhb5Q91XZ5 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhb5Q91XZ5 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhb5Q91XZ5 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhb5Q91XZ5 Olfr286-202ENSMUST00000205305 969 ntBASIC17.34■□□□□ 0.37
Pcdhb5Q91XZ5 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhb5Q91XZ5 AC149588.3-201ENSMUST00000227515 150 ntBASIC17.34■□□□□ 0.37
Pcdhb5Q91XZ5 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhb5Q91XZ5 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhb5Q91XZ5 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhb5Q91XZ5 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms