Protein–RNA interactions for Protein: Q8VIM6

Strc, Stereocilin, mousemouse

Predictions only

Length 1,809 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
StrcQ8VIM6 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
StrcQ8VIM6 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
StrcQ8VIM6 Proscos-202ENSMUST00000178990 666 ntBASIC17.27■□□□□ 0.36
StrcQ8VIM6 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC17.27■□□□□ 0.36
StrcQ8VIM6 Gm45930-201ENSMUST00000221330 292 ntBASIC17.27■□□□□ 0.36
StrcQ8VIM6 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC17.27■□□□□ 0.35
StrcQ8VIM6 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
StrcQ8VIM6 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
StrcQ8VIM6 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
StrcQ8VIM6 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
StrcQ8VIM6 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
StrcQ8VIM6 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
StrcQ8VIM6 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
StrcQ8VIM6 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
StrcQ8VIM6 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
StrcQ8VIM6 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
StrcQ8VIM6 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC17.26■□□□□ 0.35
StrcQ8VIM6 Gm22331-201ENSMUST00000158066 136 ntBASIC17.26■□□□□ 0.35
StrcQ8VIM6 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC17.26■□□□□ 0.35
StrcQ8VIM6 Gm38002-201ENSMUST00000193255 180 ntBASIC17.26■□□□□ 0.35
StrcQ8VIM6 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC17.26■□□□□ 0.35
StrcQ8VIM6 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC17.26■□□□□ 0.35
StrcQ8VIM6 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
StrcQ8VIM6 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
StrcQ8VIM6 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
StrcQ8VIM6 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
StrcQ8VIM6 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
StrcQ8VIM6 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
StrcQ8VIM6 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
StrcQ8VIM6 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
StrcQ8VIM6 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
StrcQ8VIM6 Gm15236-201ENSMUST00000117309 379 ntBASIC17.26■□□□□ 0.35
StrcQ8VIM6 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC17.26■□□□□ 0.35
StrcQ8VIM6 Gm8810-201ENSMUST00000172895 754 ntBASIC17.26■□□□□ 0.35
StrcQ8VIM6 Mir3102-201ENSMUST00000175555 104 ntBASIC17.26■□□□□ 0.35
StrcQ8VIM6 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC17.26■□□□□ 0.35
StrcQ8VIM6 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
StrcQ8VIM6 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
StrcQ8VIM6 AC102291.3-201ENSMUST00000226566 405 ntBASIC17.26■□□□□ 0.35
StrcQ8VIM6 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
StrcQ8VIM6 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
StrcQ8VIM6 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
StrcQ8VIM6 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
StrcQ8VIM6 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
StrcQ8VIM6 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
StrcQ8VIM6 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
StrcQ8VIM6 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
StrcQ8VIM6 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
StrcQ8VIM6 AC161252.3-201ENSMUST00000225465 1549 ntBASIC17.25■□□□□ 0.35
StrcQ8VIM6 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
StrcQ8VIM6 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
StrcQ8VIM6 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
StrcQ8VIM6 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
StrcQ8VIM6 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
StrcQ8VIM6 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
StrcQ8VIM6 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
StrcQ8VIM6 Gm16177-201ENSMUST00000120728 718 ntBASIC17.25■□□□□ 0.35
StrcQ8VIM6 Gm13385-201ENSMUST00000121089 220 ntBASIC17.25■□□□□ 0.35
StrcQ8VIM6 Gm6152-201ENSMUST00000151704 340 ntBASIC17.25■□□□□ 0.35
StrcQ8VIM6 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
StrcQ8VIM6 Gm43133-201ENSMUST00000197472 463 ntBASIC17.25■□□□□ 0.35
StrcQ8VIM6 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC17.25■□□□□ 0.35
StrcQ8VIM6 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
StrcQ8VIM6 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
StrcQ8VIM6 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
StrcQ8VIM6 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
StrcQ8VIM6 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
StrcQ8VIM6 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
StrcQ8VIM6 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
StrcQ8VIM6 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
StrcQ8VIM6 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC17.25■□□□□ 0.35
StrcQ8VIM6 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC17.25■□□□□ 0.35
StrcQ8VIM6 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC17.25■□□□□ 0.35
StrcQ8VIM6 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
StrcQ8VIM6 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
StrcQ8VIM6 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC17.24■□□□□ 0.35
StrcQ8VIM6 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC17.24■□□□□ 0.35
StrcQ8VIM6 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
StrcQ8VIM6 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
StrcQ8VIM6 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
StrcQ8VIM6 Mir3547-201ENSMUST00000175461 88 ntBASIC17.24■□□□□ 0.35
StrcQ8VIM6 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
StrcQ8VIM6 Gm43758-201ENSMUST00000199500 367 ntBASIC17.24■□□□□ 0.35
StrcQ8VIM6 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC17.24■□□□□ 0.35
StrcQ8VIM6 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC17.24■□□□□ 0.35
StrcQ8VIM6 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
StrcQ8VIM6 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
StrcQ8VIM6 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
StrcQ8VIM6 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
StrcQ8VIM6 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
StrcQ8VIM6 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
StrcQ8VIM6 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
StrcQ8VIM6 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
StrcQ8VIM6 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
StrcQ8VIM6 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
StrcQ8VIM6 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
StrcQ8VIM6 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC17.24■□□□□ 0.35
StrcQ8VIM6 Gm27243-201ENSMUST00000183964 521 ntBASIC17.24■□□□□ 0.35
StrcQ8VIM6 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
StrcQ8VIM6 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms