Protein–RNA interactions for Protein: Q8VEJ9

Vps4a, Vacuolar protein sorting-associated protein 4A, mousemouse

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4aQ8VEJ9 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vps4aQ8VEJ9 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Vps4aQ8VEJ9 Gm3928-201ENSMUST00000121141 1307 ntBASIC14.38□□□□□ -0.11
Vps4aQ8VEJ9 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Vps4aQ8VEJ9 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Vps4aQ8VEJ9 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vps4aQ8VEJ9 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vps4aQ8VEJ9 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vps4aQ8VEJ9 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC14.37□□□□□ -0.11
Vps4aQ8VEJ9 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vps4aQ8VEJ9 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vps4aQ8VEJ9 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vps4aQ8VEJ9 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Vps4aQ8VEJ9 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vps4aQ8VEJ9 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vps4aQ8VEJ9 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vps4aQ8VEJ9 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vps4aQ8VEJ9 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
Vps4aQ8VEJ9 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vps4aQ8VEJ9 Gm8318-201ENSMUST00000182954 872 ntBASIC14.37□□□□□ -0.11
Vps4aQ8VEJ9 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vps4aQ8VEJ9 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vps4aQ8VEJ9 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Vps4aQ8VEJ9 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vps4aQ8VEJ9 Gm8242-201ENSMUST00000193029 1420 ntBASIC14.37□□□□□ -0.11
Vps4aQ8VEJ9 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vps4aQ8VEJ9 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vps4aQ8VEJ9 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Vps4aQ8VEJ9 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vps4aQ8VEJ9 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Vps4aQ8VEJ9 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vps4aQ8VEJ9 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vps4aQ8VEJ9 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vps4aQ8VEJ9 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vps4aQ8VEJ9 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Vps4aQ8VEJ9 AC148324.1-201ENSMUST00000219034 4240 ntBASIC14.37□□□□□ -0.11
Vps4aQ8VEJ9 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vps4aQ8VEJ9 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vps4aQ8VEJ9 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
Vps4aQ8VEJ9 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vps4aQ8VEJ9 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Vps4aQ8VEJ9 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Vps4aQ8VEJ9 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Vps4aQ8VEJ9 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC14.36□□□□□ -0.11
Vps4aQ8VEJ9 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vps4aQ8VEJ9 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Vps4aQ8VEJ9 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vps4aQ8VEJ9 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Vps4aQ8VEJ9 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Vps4aQ8VEJ9 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vps4aQ8VEJ9 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vps4aQ8VEJ9 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vps4aQ8VEJ9 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vps4aQ8VEJ9 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vps4aQ8VEJ9 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vps4aQ8VEJ9 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vps4aQ8VEJ9 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vps4aQ8VEJ9 Gm14701-201ENSMUST00000117156 348 ntBASIC14.36□□□□□ -0.11
Vps4aQ8VEJ9 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Vps4aQ8VEJ9 Gm11780-201ENSMUST00000136880 516 ntBASIC14.36□□□□□ -0.11
Vps4aQ8VEJ9 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC14.36□□□□□ -0.11
Vps4aQ8VEJ9 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vps4aQ8VEJ9 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC14.36□□□□□ -0.11
Vps4aQ8VEJ9 Gm25911-201ENSMUST00000157621 56 ntBASIC14.36□□□□□ -0.11
Vps4aQ8VEJ9 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
Vps4aQ8VEJ9 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Vps4aQ8VEJ9 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Vps4aQ8VEJ9 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vps4aQ8VEJ9 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vps4aQ8VEJ9 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Vps4aQ8VEJ9 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vps4aQ8VEJ9 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vps4aQ8VEJ9 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Vps4aQ8VEJ9 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vps4aQ8VEJ9 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vps4aQ8VEJ9 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Vps4aQ8VEJ9 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC14.36□□□□□ -0.11
Vps4aQ8VEJ9 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC14.36□□□□□ -0.11
Vps4aQ8VEJ9 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Vps4aQ8VEJ9 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Vps4aQ8VEJ9 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Vps4aQ8VEJ9 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Vps4aQ8VEJ9 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vps4aQ8VEJ9 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC14.36□□□□□ -0.11
Vps4aQ8VEJ9 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Vps4aQ8VEJ9 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vps4aQ8VEJ9 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC14.35□□□□□ -0.11
Vps4aQ8VEJ9 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Vps4aQ8VEJ9 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Vps4aQ8VEJ9 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vps4aQ8VEJ9 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Vps4aQ8VEJ9 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Vps4aQ8VEJ9 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vps4aQ8VEJ9 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Vps4aQ8VEJ9 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vps4aQ8VEJ9 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vps4aQ8VEJ9 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Vps4aQ8VEJ9 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC14.35□□□□□ -0.11
Vps4aQ8VEJ9 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vps4aQ8VEJ9 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms