Protein–RNA interactions for Protein: Q8R422

Cd109, CD109 antigen, mousemouse

Predictions only

Length 1,442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd109Q8R422 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cd109Q8R422 Gm9252-201ENSMUST00000172364 1602 ntBASIC20.8■□□□□ 0.92
Cd109Q8R422 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cd109Q8R422 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cd109Q8R422 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Cd109Q8R422 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cd109Q8R422 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cd109Q8R422 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cd109Q8R422 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cd109Q8R422 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cd109Q8R422 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cd109Q8R422 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cd109Q8R422 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cd109Q8R422 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cd109Q8R422 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Cd109Q8R422 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cd109Q8R422 Gm12138-201ENSMUST00000122180 951 ntBASIC20.79■□□□□ 0.92
Cd109Q8R422 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC20.79■□□□□ 0.92
Cd109Q8R422 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Cd109Q8R422 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cd109Q8R422 Gm9797-201ENSMUST00000052902 613 ntBASIC20.79■□□□□ 0.92
Cd109Q8R422 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Cd109Q8R422 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cd109Q8R422 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cd109Q8R422 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cd109Q8R422 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cd109Q8R422 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cd109Q8R422 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Cd109Q8R422 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cd109Q8R422 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Cd109Q8R422 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cd109Q8R422 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Cd109Q8R422 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cd109Q8R422 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cd109Q8R422 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC20.79■□□□□ 0.92
Cd109Q8R422 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Cd109Q8R422 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Cd109Q8R422 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Cd109Q8R422 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Cd109Q8R422 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cd109Q8R422 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Cd109Q8R422 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cd109Q8R422 Gm45668-201ENSMUST00000211271 493 ntBASIC20.78■□□□□ 0.92
Cd109Q8R422 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC20.78■□□□□ 0.92
Cd109Q8R422 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cd109Q8R422 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cd109Q8R422 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC20.78■□□□□ 0.92
Cd109Q8R422 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cd109Q8R422 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cd109Q8R422 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC20.78■□□□□ 0.92
Cd109Q8R422 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cd109Q8R422 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cd109Q8R422 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Cd109Q8R422 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
Cd109Q8R422 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Cd109Q8R422 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cd109Q8R422 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Cd109Q8R422 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cd109Q8R422 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Cd109Q8R422 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC20.78■□□□□ 0.92
Cd109Q8R422 Gm28760-201ENSMUST00000185995 736 ntBASIC20.78■□□□□ 0.92
Cd109Q8R422 Gm33320-201ENSMUST00000192232 530 ntBASIC20.78■□□□□ 0.92
Cd109Q8R422 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC20.78■□□□□ 0.92
Cd109Q8R422 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC20.78■□□□□ 0.92
Cd109Q8R422 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Cd109Q8R422 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cd109Q8R422 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Cd109Q8R422 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Cd109Q8R422 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Cd109Q8R422 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC20.77■□□□□ 0.92
Cd109Q8R422 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cd109Q8R422 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cd109Q8R422 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Cd109Q8R422 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cd109Q8R422 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cd109Q8R422 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cd109Q8R422 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cd109Q8R422 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cd109Q8R422 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC20.77■□□□□ 0.92
Cd109Q8R422 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Cd109Q8R422 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Cd109Q8R422 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Cd109Q8R422 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cd109Q8R422 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cd109Q8R422 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Cd109Q8R422 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.91
Cd109Q8R422 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC20.77■□□□□ 0.91
Cd109Q8R422 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.91
Cd109Q8R422 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Cd109Q8R422 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Cd109Q8R422 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC20.77■□□□□ 0.91
Cd109Q8R422 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC20.77■□□□□ 0.91
Cd109Q8R422 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Cd109Q8R422 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cd109Q8R422 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cd109Q8R422 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cd109Q8R422 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC20.76■□□□□ 0.91
Cd109Q8R422 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cd109Q8R422 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cd109Q8R422 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms