Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Clrn1Q8K445 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Clrn1Q8K445 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Clrn1Q8K445 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Clrn1Q8K445 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Clrn1Q8K445 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Clrn1Q8K445 Camk2g-217ENSMUST00000226630 1937 ntBASIC13.96□□□□□ -0.18
Clrn1Q8K445 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Clrn1Q8K445 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Clrn1Q8K445 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Clrn1Q8K445 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Clrn1Q8K445 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Clrn1Q8K445 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Clrn1Q8K445 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Clrn1Q8K445 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Clrn1Q8K445 Gm9768-201ENSMUST00000206007 2861 ntBASIC13.95□□□□□ -0.18
Clrn1Q8K445 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Clrn1Q8K445 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Clrn1Q8K445 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC13.95□□□□□ -0.18
Clrn1Q8K445 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Clrn1Q8K445 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Clrn1Q8K445 Gm2272-201ENSMUST00000194903 582 ntBASIC13.95□□□□□ -0.18
Clrn1Q8K445 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Clrn1Q8K445 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC13.95□□□□□ -0.18
Clrn1Q8K445 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Clrn1Q8K445 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Clrn1Q8K445 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Clrn1Q8K445 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Clrn1Q8K445 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Clrn1Q8K445 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Clrn1Q8K445 Gm10605-202ENSMUST00000183019 3198 ntBASIC13.95□□□□□ -0.18
Clrn1Q8K445 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Clrn1Q8K445 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Clrn1Q8K445 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Clrn1Q8K445 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Clrn1Q8K445 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Clrn1Q8K445 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Clrn1Q8K445 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Clrn1Q8K445 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Clrn1Q8K445 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Clrn1Q8K445 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Clrn1Q8K445 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Clrn1Q8K445 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Clrn1Q8K445 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Clrn1Q8K445 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Clrn1Q8K445 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Clrn1Q8K445 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Clrn1Q8K445 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Clrn1Q8K445 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Clrn1Q8K445 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Clrn1Q8K445 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC13.94□□□□□ -0.18
Clrn1Q8K445 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Clrn1Q8K445 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Clrn1Q8K445 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
Clrn1Q8K445 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC13.94□□□□□ -0.18
Clrn1Q8K445 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Clrn1Q8K445 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Clrn1Q8K445 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Clrn1Q8K445 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Clrn1Q8K445 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Clrn1Q8K445 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Clrn1Q8K445 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Clrn1Q8K445 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Clrn1Q8K445 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Clrn1Q8K445 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
Clrn1Q8K445 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Clrn1Q8K445 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC13.94□□□□□ -0.18
Clrn1Q8K445 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Clrn1Q8K445 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Clrn1Q8K445 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC13.93□□□□□ -0.18
Clrn1Q8K445 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Clrn1Q8K445 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Clrn1Q8K445 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Clrn1Q8K445 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Clrn1Q8K445 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Clrn1Q8K445 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC13.93□□□□□ -0.18
Clrn1Q8K445 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Clrn1Q8K445 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Clrn1Q8K445 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Clrn1Q8K445 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Clrn1Q8K445 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Clrn1Q8K445 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Clrn1Q8K445 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Clrn1Q8K445 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC13.93□□□□□ -0.18
Clrn1Q8K445 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Clrn1Q8K445 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Clrn1Q8K445 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Clrn1Q8K445 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Clrn1Q8K445 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Clrn1Q8K445 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Clrn1Q8K445 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC13.93□□□□□ -0.18
Clrn1Q8K445 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Clrn1Q8K445 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Clrn1Q8K445 Gm16198-201ENSMUST00000118766 670 ntBASIC13.93□□□□□ -0.18
Clrn1Q8K445 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC13.93□□□□□ -0.18
Clrn1Q8K445 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC13.93□□□□□ -0.18
Clrn1Q8K445 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC13.93□□□□□ -0.18
Clrn1Q8K445 Gm43514-201ENSMUST00000198852 424 ntBASIC13.93□□□□□ -0.18
Clrn1Q8K445 Gm44945-201ENSMUST00000206764 1187 ntBASIC13.93□□□□□ -0.18
Clrn1Q8K445 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC13.93□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms