Protein–RNA interactions for Protein: Q8CG47

Smc4, Structural maintenance of chromosomes protein 4, mousemouse

Predictions only

Length 1,286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc4Q8CG47 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Smc4Q8CG47 Gm8749-201ENSMUST00000117737 331 ntBASIC18.21■□□□□ 0.51
Smc4Q8CG47 Gm6415-201ENSMUST00000118488 348 ntBASIC18.21■□□□□ 0.51
Smc4Q8CG47 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Smc4Q8CG47 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC18.21■□□□□ 0.51
Smc4Q8CG47 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Smc4Q8CG47 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Smc4Q8CG47 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Smc4Q8CG47 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Smc4Q8CG47 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Smc4Q8CG47 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Smc4Q8CG47 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Smc4Q8CG47 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Smc4Q8CG47 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Smc4Q8CG47 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Smc4Q8CG47 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Smc4Q8CG47 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Smc4Q8CG47 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Smc4Q8CG47 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Smc4Q8CG47 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Smc4Q8CG47 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC18.2■□□□□ 0.5
Smc4Q8CG47 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Smc4Q8CG47 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Smc4Q8CG47 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Smc4Q8CG47 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC18.2■□□□□ 0.5
Smc4Q8CG47 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Smc4Q8CG47 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Smc4Q8CG47 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Smc4Q8CG47 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Smc4Q8CG47 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Smc4Q8CG47 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Smc4Q8CG47 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Smc4Q8CG47 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Smc4Q8CG47 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Smc4Q8CG47 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC18.2■□□□□ 0.5
Smc4Q8CG47 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Smc4Q8CG47 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Smc4Q8CG47 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Smc4Q8CG47 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Smc4Q8CG47 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Smc4Q8CG47 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Smc4Q8CG47 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Smc4Q8CG47 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
Smc4Q8CG47 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Smc4Q8CG47 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Smc4Q8CG47 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Smc4Q8CG47 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Smc4Q8CG47 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC18.2■□□□□ 0.5
Smc4Q8CG47 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Smc4Q8CG47 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Smc4Q8CG47 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Smc4Q8CG47 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Smc4Q8CG47 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Smc4Q8CG47 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC18.19■□□□□ 0.5
Smc4Q8CG47 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Smc4Q8CG47 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Smc4Q8CG47 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Smc4Q8CG47 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Smc4Q8CG47 Gm9182-201ENSMUST00000217829 639 ntBASIC18.19■□□□□ 0.5
Smc4Q8CG47 AC158982.1-201ENSMUST00000228377 901 ntBASIC18.19■□□□□ 0.5
Smc4Q8CG47 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Smc4Q8CG47 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Smc4Q8CG47 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Smc4Q8CG47 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Smc4Q8CG47 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Smc4Q8CG47 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Smc4Q8CG47 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Smc4Q8CG47 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Smc4Q8CG47 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Smc4Q8CG47 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Smc4Q8CG47 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Smc4Q8CG47 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Smc4Q8CG47 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Smc4Q8CG47 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Smc4Q8CG47 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Smc4Q8CG47 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
Smc4Q8CG47 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Smc4Q8CG47 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Smc4Q8CG47 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC18.18■□□□□ 0.5
Smc4Q8CG47 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Smc4Q8CG47 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Smc4Q8CG47 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Smc4Q8CG47 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Smc4Q8CG47 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC18.18■□□□□ 0.5
Smc4Q8CG47 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Smc4Q8CG47 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Smc4Q8CG47 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Smc4Q8CG47 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Smc4Q8CG47 Gm6756-201ENSMUST00000180647 1620 ntBASIC18.18■□□□□ 0.5
Smc4Q8CG47 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Smc4Q8CG47 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Smc4Q8CG47 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Smc4Q8CG47 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Smc4Q8CG47 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Smc4Q8CG47 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Smc4Q8CG47 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Smc4Q8CG47 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Smc4Q8CG47 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Smc4Q8CG47 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Smc4Q8CG47 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms