Protein–RNA interactions for Protein: Q8CEQ0

Cdkl1, Cyclin-dependent kinase-like 1, mousemouse

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkl1Q8CEQ0 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cdkl1Q8CEQ0 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC14.04□□□□□ -0.16
Cdkl1Q8CEQ0 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cdkl1Q8CEQ0 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Cdkl1Q8CEQ0 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Cdkl1Q8CEQ0 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Cdkl1Q8CEQ0 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cdkl1Q8CEQ0 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Cdkl1Q8CEQ0 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Cdkl1Q8CEQ0 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cdkl1Q8CEQ0 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cdkl1Q8CEQ0 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC14.04□□□□□ -0.16
Cdkl1Q8CEQ0 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cdkl1Q8CEQ0 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC14.04□□□□□ -0.16
Cdkl1Q8CEQ0 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cdkl1Q8CEQ0 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cdkl1Q8CEQ0 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC14.04□□□□□ -0.16
Cdkl1Q8CEQ0 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC14.04□□□□□ -0.16
Cdkl1Q8CEQ0 AC154222.1-201ENSMUST00000223882 475 ntBASIC14.04□□□□□ -0.16
Cdkl1Q8CEQ0 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC14.04□□□□□ -0.16
Cdkl1Q8CEQ0 Gm10154-201ENSMUST00000084445 354 ntBASIC14.04□□□□□ -0.16
Cdkl1Q8CEQ0 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cdkl1Q8CEQ0 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
Cdkl1Q8CEQ0 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cdkl1Q8CEQ0 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC14.04□□□□□ -0.16
Cdkl1Q8CEQ0 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cdkl1Q8CEQ0 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Cdkl1Q8CEQ0 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cdkl1Q8CEQ0 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
Cdkl1Q8CEQ0 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cdkl1Q8CEQ0 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Cdkl1Q8CEQ0 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
Cdkl1Q8CEQ0 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC14.03□□□□□ -0.16
Cdkl1Q8CEQ0 Gm16198-201ENSMUST00000118766 670 ntBASIC14.03□□□□□ -0.16
Cdkl1Q8CEQ0 Gm14140-201ENSMUST00000119999 995 ntBASIC14.03□□□□□ -0.16
Cdkl1Q8CEQ0 Gm18733-201ENSMUST00000173950 856 ntBASIC14.03□□□□□ -0.16
Cdkl1Q8CEQ0 Gm4691-201ENSMUST00000182339 1000 ntBASIC14.03□□□□□ -0.16
Cdkl1Q8CEQ0 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC14.03□□□□□ -0.16
Cdkl1Q8CEQ0 Gm2451-201ENSMUST00000199447 999 ntBASIC14.03□□□□□ -0.16
Cdkl1Q8CEQ0 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cdkl1Q8CEQ0 Gm10290-201ENSMUST00000200451 999 ntBASIC14.03□□□□□ -0.16
Cdkl1Q8CEQ0 Olfr286-202ENSMUST00000205305 969 ntBASIC14.03□□□□□ -0.16
Cdkl1Q8CEQ0 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cdkl1Q8CEQ0 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cdkl1Q8CEQ0 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Cdkl1Q8CEQ0 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cdkl1Q8CEQ0 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cdkl1Q8CEQ0 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Cdkl1Q8CEQ0 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cdkl1Q8CEQ0 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cdkl1Q8CEQ0 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cdkl1Q8CEQ0 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
Cdkl1Q8CEQ0 AC126250.1-201ENSMUST00000228343 1768 ntBASIC14.03□□□□□ -0.16
Cdkl1Q8CEQ0 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Cdkl1Q8CEQ0 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cdkl1Q8CEQ0 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cdkl1Q8CEQ0 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Cdkl1Q8CEQ0 AC167013.2-201ENSMUST00000228520 2684 ntBASIC14.03□□□□□ -0.16
Cdkl1Q8CEQ0 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cdkl1Q8CEQ0 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cdkl1Q8CEQ0 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cdkl1Q8CEQ0 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cdkl1Q8CEQ0 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cdkl1Q8CEQ0 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Cdkl1Q8CEQ0 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC14.02□□□□□ -0.16
Cdkl1Q8CEQ0 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cdkl1Q8CEQ0 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Cdkl1Q8CEQ0 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cdkl1Q8CEQ0 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.16
Cdkl1Q8CEQ0 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Cdkl1Q8CEQ0 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Cdkl1Q8CEQ0 AC122901.1-201ENSMUST00000214203 1790 ntBASIC14.02□□□□□ -0.16
Cdkl1Q8CEQ0 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cdkl1Q8CEQ0 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cdkl1Q8CEQ0 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC14.02□□□□□ -0.16
Cdkl1Q8CEQ0 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Cdkl1Q8CEQ0 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Cdkl1Q8CEQ0 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cdkl1Q8CEQ0 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC14.02□□□□□ -0.17
Cdkl1Q8CEQ0 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC14.02□□□□□ -0.17
Cdkl1Q8CEQ0 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC14.02□□□□□ -0.17
Cdkl1Q8CEQ0 Gm5177-201ENSMUST00000183092 997 ntBASIC14.02□□□□□ -0.17
Cdkl1Q8CEQ0 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Cdkl1Q8CEQ0 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cdkl1Q8CEQ0 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
Cdkl1Q8CEQ0 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Cdkl1Q8CEQ0 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cdkl1Q8CEQ0 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC14.02□□□□□ -0.17
Cdkl1Q8CEQ0 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cdkl1Q8CEQ0 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cdkl1Q8CEQ0 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cdkl1Q8CEQ0 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cdkl1Q8CEQ0 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Cdkl1Q8CEQ0 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cdkl1Q8CEQ0 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cdkl1Q8CEQ0 Gm43205-201ENSMUST00000198622 1968 ntBASIC14.02□□□□□ -0.17
Cdkl1Q8CEQ0 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC14.02□□□□□ -0.17
Cdkl1Q8CEQ0 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdkl1Q8CEQ0 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cdkl1Q8CEQ0 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms