Protein–RNA interactions for Protein: Q8CDV0

Ccdc178, Coiled-coil domain-containing protein 178, mousemouse

Predictions only

Length 866 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc178Q8CDV0 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc178Q8CDV0 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc178Q8CDV0 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc178Q8CDV0 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc178Q8CDV0 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC17.57■□□□□ 0.4
Ccdc178Q8CDV0 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
Ccdc178Q8CDV0 AC151286.1-201ENSMUST00000198489 145 ntBASIC17.57■□□□□ 0.4
Ccdc178Q8CDV0 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc178Q8CDV0 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc178Q8CDV0 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc178Q8CDV0 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc178Q8CDV0 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc178Q8CDV0 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc178Q8CDV0 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Ccdc178Q8CDV0 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC17.57■□□□□ 0.4
Ccdc178Q8CDV0 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc178Q8CDV0 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc178Q8CDV0 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc178Q8CDV0 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC17.57■□□□□ 0.4
Ccdc178Q8CDV0 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc178Q8CDV0 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC17.56■□□□□ 0.4
Ccdc178Q8CDV0 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
Ccdc178Q8CDV0 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc178Q8CDV0 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc178Q8CDV0 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc178Q8CDV0 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc178Q8CDV0 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc178Q8CDV0 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc178Q8CDV0 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc178Q8CDV0 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc178Q8CDV0 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Ccdc178Q8CDV0 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Ccdc178Q8CDV0 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC17.56■□□□□ 0.4
Ccdc178Q8CDV0 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc178Q8CDV0 Gm45747-201ENSMUST00000212203 999 ntBASIC17.56■□□□□ 0.4
Ccdc178Q8CDV0 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Ccdc178Q8CDV0 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc178Q8CDV0 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc178Q8CDV0 Fbxl12-205ENSMUST00000140702 1555 ntBASIC17.56■□□□□ 0.4
Ccdc178Q8CDV0 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC17.56■□□□□ 0.4
Ccdc178Q8CDV0 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc178Q8CDV0 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc178Q8CDV0 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC17.56■□□□□ 0.4
Ccdc178Q8CDV0 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Ccdc178Q8CDV0 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC17.56■□□□□ 0.4
Ccdc178Q8CDV0 Gm12620-201ENSMUST00000119791 1986 ntBASIC17.55■□□□□ 0.4
Ccdc178Q8CDV0 Gm12612-201ENSMUST00000140182 1986 ntBASIC17.55■□□□□ 0.4
Ccdc178Q8CDV0 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc178Q8CDV0 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc178Q8CDV0 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc178Q8CDV0 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc178Q8CDV0 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Ccdc178Q8CDV0 Gm12008-201ENSMUST00000117791 755 ntBASIC17.55■□□□□ 0.4
Ccdc178Q8CDV0 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Ccdc178Q8CDV0 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC17.55■□□□□ 0.4
Ccdc178Q8CDV0 Gm27301-201ENSMUST00000184012 127 ntBASIC17.55■□□□□ 0.4
Ccdc178Q8CDV0 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC17.55■□□□□ 0.4
Ccdc178Q8CDV0 Gm7556-201ENSMUST00000201178 1084 ntBASIC17.55■□□□□ 0.4
Ccdc178Q8CDV0 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Ccdc178Q8CDV0 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC17.55■□□□□ 0.4
Ccdc178Q8CDV0 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc178Q8CDV0 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc178Q8CDV0 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc178Q8CDV0 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc178Q8CDV0 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc178Q8CDV0 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc178Q8CDV0 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc178Q8CDV0 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc178Q8CDV0 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc178Q8CDV0 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc178Q8CDV0 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc178Q8CDV0 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC17.54■□□□□ 0.4
Ccdc178Q8CDV0 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc178Q8CDV0 Gm26308-201ENSMUST00000157768 69 ntBASIC17.54■□□□□ 0.4
Ccdc178Q8CDV0 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC17.54■□□□□ 0.4
Ccdc178Q8CDV0 Thap2-203ENSMUST00000218989 527 ntBASIC17.54■□□□□ 0.4
Ccdc178Q8CDV0 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc178Q8CDV0 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc178Q8CDV0 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc178Q8CDV0 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc178Q8CDV0 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Ccdc178Q8CDV0 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Ccdc178Q8CDV0 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc178Q8CDV0 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc178Q8CDV0 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Ccdc178Q8CDV0 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc178Q8CDV0 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC17.54■□□□□ 0.4
Ccdc178Q8CDV0 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc178Q8CDV0 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Ccdc178Q8CDV0 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc178Q8CDV0 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc178Q8CDV0 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Ccdc178Q8CDV0 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc178Q8CDV0 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc178Q8CDV0 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc178Q8CDV0 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc178Q8CDV0 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc178Q8CDV0 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC17.53■□□□□ 0.4
Ccdc178Q8CDV0 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc178Q8CDV0 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms