Protein–RNA interactions for Protein: Q8CDR2

Rsph6a, Radial spoke head protein 6 homolog A, mousemouse

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rsph6aQ8CDR2 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rsph6aQ8CDR2 Mir7684-201ENSMUST00000183858 60 ntBASIC19.23■□□□□ 0.67
Rsph6aQ8CDR2 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Rsph6aQ8CDR2 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rsph6aQ8CDR2 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rsph6aQ8CDR2 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Rsph6aQ8CDR2 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC19.23■□□□□ 0.67
Rsph6aQ8CDR2 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rsph6aQ8CDR2 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rsph6aQ8CDR2 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Rsph6aQ8CDR2 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Rsph6aQ8CDR2 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rsph6aQ8CDR2 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Rsph6aQ8CDR2 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rsph6aQ8CDR2 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rsph6aQ8CDR2 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rsph6aQ8CDR2 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rsph6aQ8CDR2 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rsph6aQ8CDR2 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rsph6aQ8CDR2 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Rsph6aQ8CDR2 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rsph6aQ8CDR2 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Rsph6aQ8CDR2 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Rsph6aQ8CDR2 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC19.22■□□□□ 0.67
Rsph6aQ8CDR2 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rsph6aQ8CDR2 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Rsph6aQ8CDR2 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Rsph6aQ8CDR2 Gm37319-201ENSMUST00000193500 636 ntBASIC19.22■□□□□ 0.67
Rsph6aQ8CDR2 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Rsph6aQ8CDR2 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Rsph6aQ8CDR2 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rsph6aQ8CDR2 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rsph6aQ8CDR2 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Rsph6aQ8CDR2 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Rsph6aQ8CDR2 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rsph6aQ8CDR2 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Rsph6aQ8CDR2 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rsph6aQ8CDR2 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rsph6aQ8CDR2 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Rsph6aQ8CDR2 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rsph6aQ8CDR2 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rsph6aQ8CDR2 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Rsph6aQ8CDR2 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Rsph6aQ8CDR2 Gm6222-201ENSMUST00000120787 396 ntBASIC19.21■□□□□ 0.67
Rsph6aQ8CDR2 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Rsph6aQ8CDR2 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Rsph6aQ8CDR2 Gm27631-201ENSMUST00000184163 466 ntBASIC19.21■□□□□ 0.67
Rsph6aQ8CDR2 Mir6977-201ENSMUST00000184960 64 ntBASIC19.21■□□□□ 0.67
Rsph6aQ8CDR2 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Rsph6aQ8CDR2 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC19.21■□□□□ 0.67
Rsph6aQ8CDR2 Gm16476-201ENSMUST00000221544 139 ntBASIC19.21■□□□□ 0.67
Rsph6aQ8CDR2 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rsph6aQ8CDR2 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rsph6aQ8CDR2 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rsph6aQ8CDR2 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rsph6aQ8CDR2 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rsph6aQ8CDR2 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Rsph6aQ8CDR2 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rsph6aQ8CDR2 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Rsph6aQ8CDR2 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rsph6aQ8CDR2 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rsph6aQ8CDR2 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rsph6aQ8CDR2 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rsph6aQ8CDR2 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rsph6aQ8CDR2 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rsph6aQ8CDR2 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rsph6aQ8CDR2 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rsph6aQ8CDR2 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC19.2■□□□□ 0.66
Rsph6aQ8CDR2 AC124751.1-201ENSMUST00000222716 1408 ntBASIC19.2■□□□□ 0.66
Rsph6aQ8CDR2 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rsph6aQ8CDR2 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rsph6aQ8CDR2 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC19.2■□□□□ 0.66
Rsph6aQ8CDR2 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Rsph6aQ8CDR2 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC19.2■□□□□ 0.66
Rsph6aQ8CDR2 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC19.2■□□□□ 0.66
Rsph6aQ8CDR2 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC19.2■□□□□ 0.66
Rsph6aQ8CDR2 Gm9182-201ENSMUST00000217829 639 ntBASIC19.2■□□□□ 0.66
Rsph6aQ8CDR2 Dupd1-202ENSMUST00000224735 548 ntBASIC19.2■□□□□ 0.66
Rsph6aQ8CDR2 CT025535.1-201ENSMUST00000227172 491 ntBASIC19.2■□□□□ 0.66
Rsph6aQ8CDR2 AC149588.3-201ENSMUST00000227515 150 ntBASIC19.2■□□□□ 0.66
Rsph6aQ8CDR2 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rsph6aQ8CDR2 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rsph6aQ8CDR2 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rsph6aQ8CDR2 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC19.2■□□□□ 0.66
Rsph6aQ8CDR2 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC19.2■□□□□ 0.66
Rsph6aQ8CDR2 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rsph6aQ8CDR2 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rsph6aQ8CDR2 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rsph6aQ8CDR2 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Rsph6aQ8CDR2 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Rsph6aQ8CDR2 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rsph6aQ8CDR2 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rsph6aQ8CDR2 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rsph6aQ8CDR2 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rsph6aQ8CDR2 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rsph6aQ8CDR2 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rsph6aQ8CDR2 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC19.19■□□□□ 0.66
Rsph6aQ8CDR2 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC19.19■□□□□ 0.66
Rsph6aQ8CDR2 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Rsph6aQ8CDR2 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms