Protein–RNA interactions for Protein: Q8BL06

Usp54, Inactive ubiquitin carboxyl-terminal hydrolase 54, mousemouse

Known RBP Predictions only

Length 1,588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp54Q8BL06 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Usp54Q8BL06 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Usp54Q8BL06 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Usp54Q8BL06 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Usp54Q8BL06 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
Usp54Q8BL06 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
Usp54Q8BL06 Gm18307-201ENSMUST00000206864 949 ntBASIC20.71■□□□□ 0.91
Usp54Q8BL06 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Usp54Q8BL06 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC20.71■□□□□ 0.91
Usp54Q8BL06 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
Usp54Q8BL06 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Usp54Q8BL06 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Usp54Q8BL06 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Usp54Q8BL06 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Usp54Q8BL06 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Usp54Q8BL06 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC20.71■□□□□ 0.91
Usp54Q8BL06 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Usp54Q8BL06 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Usp54Q8BL06 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Usp54Q8BL06 Gm43352-201ENSMUST00000196419 3065 ntBASIC20.7■□□□□ 0.9
Usp54Q8BL06 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Usp54Q8BL06 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Usp54Q8BL06 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Usp54Q8BL06 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Usp54Q8BL06 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Usp54Q8BL06 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Usp54Q8BL06 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC20.7■□□□□ 0.9
Usp54Q8BL06 Gm13226-201ENSMUST00000117838 404 ntBASIC20.7■□□□□ 0.9
Usp54Q8BL06 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Usp54Q8BL06 Gm27892-201ENSMUST00000185017 106 ntBASIC20.7■□□□□ 0.9
Usp54Q8BL06 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC20.7■□□□□ 0.9
Usp54Q8BL06 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC20.7■□□□□ 0.9
Usp54Q8BL06 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC20.7■□□□□ 0.9
Usp54Q8BL06 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC20.7■□□□□ 0.9
Usp54Q8BL06 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC20.7■□□□□ 0.9
Usp54Q8BL06 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Usp54Q8BL06 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Usp54Q8BL06 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Usp54Q8BL06 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Usp54Q8BL06 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Usp54Q8BL06 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Usp54Q8BL06 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Usp54Q8BL06 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Usp54Q8BL06 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Usp54Q8BL06 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Usp54Q8BL06 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Usp54Q8BL06 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Usp54Q8BL06 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Usp54Q8BL06 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Usp54Q8BL06 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Usp54Q8BL06 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Usp54Q8BL06 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Usp54Q8BL06 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Usp54Q8BL06 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Usp54Q8BL06 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Usp54Q8BL06 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Usp54Q8BL06 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Usp54Q8BL06 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Usp54Q8BL06 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC20.69■□□□□ 0.9
Usp54Q8BL06 Gm6244-201ENSMUST00000178732 841 ntBASIC20.69■□□□□ 0.9
Usp54Q8BL06 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Usp54Q8BL06 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Usp54Q8BL06 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Usp54Q8BL06 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC20.69■□□□□ 0.9
Usp54Q8BL06 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC20.69■□□□□ 0.9
Usp54Q8BL06 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC20.69■□□□□ 0.9
Usp54Q8BL06 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Usp54Q8BL06 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Usp54Q8BL06 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Usp54Q8BL06 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Usp54Q8BL06 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC20.68■□□□□ 0.9
Usp54Q8BL06 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC20.68■□□□□ 0.9
Usp54Q8BL06 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Usp54Q8BL06 Gm15376-201ENSMUST00000122258 783 ntBASIC20.68■□□□□ 0.9
Usp54Q8BL06 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC20.68■□□□□ 0.9
Usp54Q8BL06 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC20.68■□□□□ 0.9
Usp54Q8BL06 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Usp54Q8BL06 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC20.68■□□□□ 0.9
Usp54Q8BL06 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Usp54Q8BL06 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Usp54Q8BL06 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Usp54Q8BL06 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Usp54Q8BL06 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Usp54Q8BL06 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Usp54Q8BL06 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Usp54Q8BL06 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Usp54Q8BL06 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Usp54Q8BL06 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Usp54Q8BL06 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Usp54Q8BL06 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC20.68■□□□□ 0.9
Usp54Q8BL06 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Usp54Q8BL06 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Usp54Q8BL06 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Usp54Q8BL06 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Usp54Q8BL06 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC20.67■□□□□ 0.9
Usp54Q8BL06 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC20.67■□□□□ 0.9
Usp54Q8BL06 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Usp54Q8BL06 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Usp54Q8BL06 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Usp54Q8BL06 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms