Protein–RNA interactions for Protein: Q8BL00

Cdhr3, Cadherin-related family member 3, mousemouse

Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr3Q8BL00 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdhr3Q8BL00 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdhr3Q8BL00 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdhr3Q8BL00 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Cdhr3Q8BL00 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Cdhr3Q8BL00 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdhr3Q8BL00 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC12.93□□□□□ -0.34
Cdhr3Q8BL00 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Cdhr3Q8BL00 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC12.93□□□□□ -0.34
Cdhr3Q8BL00 Gm5253-201ENSMUST00000187104 1025 ntBASIC12.93□□□□□ -0.34
Cdhr3Q8BL00 Gm9682-201ENSMUST00000197505 556 ntBASIC12.93□□□□□ -0.34
Cdhr3Q8BL00 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC12.93□□□□□ -0.34
Cdhr3Q8BL00 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdhr3Q8BL00 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdhr3Q8BL00 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdhr3Q8BL00 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdhr3Q8BL00 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdhr3Q8BL00 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdhr3Q8BL00 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdhr3Q8BL00 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdhr3Q8BL00 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdhr3Q8BL00 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdhr3Q8BL00 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Cdhr3Q8BL00 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC12.93□□□□□ -0.34
Cdhr3Q8BL00 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cdhr3Q8BL00 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Cdhr3Q8BL00 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cdhr3Q8BL00 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cdhr3Q8BL00 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cdhr3Q8BL00 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cdhr3Q8BL00 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cdhr3Q8BL00 Gm44981-201ENSMUST00000205549 1943 ntBASIC12.92□□□□□ -0.34
Cdhr3Q8BL00 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cdhr3Q8BL00 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cdhr3Q8BL00 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cdhr3Q8BL00 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cdhr3Q8BL00 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cdhr3Q8BL00 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cdhr3Q8BL00 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cdhr3Q8BL00 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cdhr3Q8BL00 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Cdhr3Q8BL00 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cdhr3Q8BL00 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC12.92□□□□□ -0.34
Cdhr3Q8BL00 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC12.92□□□□□ -0.34
Cdhr3Q8BL00 Gm5682-201ENSMUST00000173402 505 ntBASIC12.92□□□□□ -0.34
Cdhr3Q8BL00 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Cdhr3Q8BL00 Gm37153-201ENSMUST00000193637 231 ntBASIC12.92□□□□□ -0.34
Cdhr3Q8BL00 Gm44357-201ENSMUST00000195897 142 ntBASIC12.92□□□□□ -0.34
Cdhr3Q8BL00 Gm19658-201ENSMUST00000196231 138 ntBASIC12.92□□□□□ -0.34
Cdhr3Q8BL00 Gm44367-201ENSMUST00000196836 138 ntBASIC12.92□□□□□ -0.34
Cdhr3Q8BL00 Gm44350-201ENSMUST00000197197 138 ntBASIC12.92□□□□□ -0.34
Cdhr3Q8BL00 Gm44390-201ENSMUST00000197533 144 ntBASIC12.92□□□□□ -0.34
Cdhr3Q8BL00 Gm44313-201ENSMUST00000198018 138 ntBASIC12.92□□□□□ -0.34
Cdhr3Q8BL00 Gm44486-201ENSMUST00000198508 138 ntBASIC12.92□□□□□ -0.34
Cdhr3Q8BL00 Gm44314-201ENSMUST00000199263 138 ntBASIC12.92□□□□□ -0.34
Cdhr3Q8BL00 Gm44394-201ENSMUST00000199558 138 ntBASIC12.92□□□□□ -0.34
Cdhr3Q8BL00 Gm44484-201ENSMUST00000199873 138 ntBASIC12.92□□□□□ -0.34
Cdhr3Q8BL00 Gm44466-201ENSMUST00000200264 138 ntBASIC12.92□□□□□ -0.34
Cdhr3Q8BL00 Gm44359-201ENSMUST00000200671 138 ntBASIC12.92□□□□□ -0.34
Cdhr3Q8BL00 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cdhr3Q8BL00 Gm18669-201ENSMUST00000216049 778 ntBASIC12.92□□□□□ -0.34
Cdhr3Q8BL00 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Cdhr3Q8BL00 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Cdhr3Q8BL00 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cdhr3Q8BL00 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cdhr3Q8BL00 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cdhr3Q8BL00 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Cdhr3Q8BL00 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Cdhr3Q8BL00 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cdhr3Q8BL00 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cdhr3Q8BL00 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cdhr3Q8BL00 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Cdhr3Q8BL00 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Cdhr3Q8BL00 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cdhr3Q8BL00 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Cdhr3Q8BL00 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Cdhr3Q8BL00 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cdhr3Q8BL00 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Cdhr3Q8BL00 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Cdhr3Q8BL00 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Cdhr3Q8BL00 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Cdhr3Q8BL00 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cdhr3Q8BL00 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Cdhr3Q8BL00 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC12.91□□□□□ -0.34
Cdhr3Q8BL00 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cdhr3Q8BL00 Gm3928-201ENSMUST00000121141 1307 ntBASIC12.91□□□□□ -0.34
Cdhr3Q8BL00 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cdhr3Q8BL00 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cdhr3Q8BL00 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cdhr3Q8BL00 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Cdhr3Q8BL00 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cdhr3Q8BL00 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Cdhr3Q8BL00 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cdhr3Q8BL00 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cdhr3Q8BL00 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cdhr3Q8BL00 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cdhr3Q8BL00 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cdhr3Q8BL00 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cdhr3Q8BL00 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cdhr3Q8BL00 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC12.91□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms