Protein–RNA interactions for Protein: Q8BHH8

Clrn3, Clarin-3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3Q8BHH8 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Clrn3Q8BHH8 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Clrn3Q8BHH8 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Clrn3Q8BHH8 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Clrn3Q8BHH8 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
Clrn3Q8BHH8 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Clrn3Q8BHH8 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Clrn3Q8BHH8 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Clrn3Q8BHH8 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Clrn3Q8BHH8 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Clrn3Q8BHH8 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Clrn3Q8BHH8 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Clrn3Q8BHH8 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Clrn3Q8BHH8 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Clrn3Q8BHH8 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Clrn3Q8BHH8 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC13.91□□□□□ -0.18
Clrn3Q8BHH8 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Clrn3Q8BHH8 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Clrn3Q8BHH8 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Clrn3Q8BHH8 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Clrn3Q8BHH8 Celf4-206ENSMUST00000224553 1729 ntBASIC13.91□□□□□ -0.18
Clrn3Q8BHH8 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Clrn3Q8BHH8 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC13.91□□□□□ -0.18
Clrn3Q8BHH8 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Clrn3Q8BHH8 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC13.91□□□□□ -0.18
Clrn3Q8BHH8 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Clrn3Q8BHH8 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Clrn3Q8BHH8 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Clrn3Q8BHH8 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Clrn3Q8BHH8 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Clrn3Q8BHH8 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Clrn3Q8BHH8 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Clrn3Q8BHH8 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Clrn3Q8BHH8 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Clrn3Q8BHH8 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Clrn3Q8BHH8 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Clrn3Q8BHH8 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Clrn3Q8BHH8 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Clrn3Q8BHH8 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Clrn3Q8BHH8 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Clrn3Q8BHH8 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Clrn3Q8BHH8 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC13.91□□□□□ -0.18
Clrn3Q8BHH8 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Clrn3Q8BHH8 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Clrn3Q8BHH8 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Clrn3Q8BHH8 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Clrn3Q8BHH8 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Clrn3Q8BHH8 Gm8242-201ENSMUST00000193029 1420 ntBASIC13.9□□□□□ -0.18
Clrn3Q8BHH8 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Clrn3Q8BHH8 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Clrn3Q8BHH8 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC13.9□□□□□ -0.18
Clrn3Q8BHH8 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC13.9□□□□□ -0.18
Clrn3Q8BHH8 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Clrn3Q8BHH8 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC13.9□□□□□ -0.18
Clrn3Q8BHH8 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC13.9□□□□□ -0.18
Clrn3Q8BHH8 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Clrn3Q8BHH8 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Clrn3Q8BHH8 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC13.9□□□□□ -0.18
Clrn3Q8BHH8 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC13.9□□□□□ -0.18
Clrn3Q8BHH8 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Clrn3Q8BHH8 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Clrn3Q8BHH8 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Clrn3Q8BHH8 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Clrn3Q8BHH8 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Clrn3Q8BHH8 AC153366.2-201ENSMUST00000219461 1984 ntBASIC13.9□□□□□ -0.18
Clrn3Q8BHH8 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Clrn3Q8BHH8 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Clrn3Q8BHH8 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Clrn3Q8BHH8 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Clrn3Q8BHH8 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Clrn3Q8BHH8 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Clrn3Q8BHH8 Rubie-203ENSMUST00000227803 2430 ntBASIC13.9□□□□□ -0.18
Clrn3Q8BHH8 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Clrn3Q8BHH8 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Clrn3Q8BHH8 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Clrn3Q8BHH8 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC13.9□□□□□ -0.18
Clrn3Q8BHH8 Gm13294-201ENSMUST00000121757 1330 ntBASIC13.9□□□□□ -0.19
Clrn3Q8BHH8 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Clrn3Q8BHH8 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Clrn3Q8BHH8 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Clrn3Q8BHH8 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Clrn3Q8BHH8 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Clrn3Q8BHH8 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Clrn3Q8BHH8 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Clrn3Q8BHH8 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Clrn3Q8BHH8 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC13.89□□□□□ -0.19
Clrn3Q8BHH8 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Clrn3Q8BHH8 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC13.89□□□□□ -0.19
Clrn3Q8BHH8 Gm43935-201ENSMUST00000203569 1050 ntBASIC13.89□□□□□ -0.19
Clrn3Q8BHH8 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC13.89□□□□□ -0.19
Clrn3Q8BHH8 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC13.89□□□□□ -0.19
Clrn3Q8BHH8 Gm18246-201ENSMUST00000221023 728 ntBASIC13.89□□□□□ -0.19
Clrn3Q8BHH8 CT010506.4-201ENSMUST00000225457 351 ntBASIC13.89□□□□□ -0.19
Clrn3Q8BHH8 Kcnk16-202ENSMUST00000225596 2127 ntBASIC13.89□□□□□ -0.19
Clrn3Q8BHH8 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Clrn3Q8BHH8 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Clrn3Q8BHH8 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Clrn3Q8BHH8 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Clrn3Q8BHH8 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Clrn3Q8BHH8 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms