Protein–RNA interactions for Protein: Q80ZI1

Trnp1, TMF-regulated nuclear protein 1, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnp1Q80ZI1 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trnp1Q80ZI1 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Trnp1Q80ZI1 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trnp1Q80ZI1 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC16.55■□□□□ 0.24
Trnp1Q80ZI1 Ighv1-25-201ENSMUST00000195638 345 ntBASIC16.55■□□□□ 0.24
Trnp1Q80ZI1 Gm5279-201ENSMUST00000199575 745 ntBASIC16.55■□□□□ 0.24
Trnp1Q80ZI1 Gm44799-201ENSMUST00000207639 1202 ntBASIC16.55■□□□□ 0.24
Trnp1Q80ZI1 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trnp1Q80ZI1 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trnp1Q80ZI1 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trnp1Q80ZI1 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trnp1Q80ZI1 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trnp1Q80ZI1 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trnp1Q80ZI1 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trnp1Q80ZI1 Gm14452-201ENSMUST00000118680 1632 ntBASIC16.55■□□□□ 0.24
Trnp1Q80ZI1 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trnp1Q80ZI1 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trnp1Q80ZI1 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trnp1Q80ZI1 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trnp1Q80ZI1 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trnp1Q80ZI1 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC16.55■□□□□ 0.24
Trnp1Q80ZI1 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trnp1Q80ZI1 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Trnp1Q80ZI1 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC16.54■□□□□ 0.24
Trnp1Q80ZI1 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Trnp1Q80ZI1 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trnp1Q80ZI1 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trnp1Q80ZI1 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trnp1Q80ZI1 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Trnp1Q80ZI1 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trnp1Q80ZI1 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Trnp1Q80ZI1 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC16.54■□□□□ 0.24
Trnp1Q80ZI1 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Trnp1Q80ZI1 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC16.54■□□□□ 0.24
Trnp1Q80ZI1 Gm6244-201ENSMUST00000178732 841 ntBASIC16.54■□□□□ 0.24
Trnp1Q80ZI1 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trnp1Q80ZI1 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Trnp1Q80ZI1 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Trnp1Q80ZI1 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trnp1Q80ZI1 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trnp1Q80ZI1 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC16.54■□□□□ 0.24
Trnp1Q80ZI1 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Trnp1Q80ZI1 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Trnp1Q80ZI1 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trnp1Q80ZI1 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Trnp1Q80ZI1 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Trnp1Q80ZI1 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trnp1Q80ZI1 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Trnp1Q80ZI1 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trnp1Q80ZI1 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trnp1Q80ZI1 Mir692-1-201ENSMUST00000102263 109 ntBASIC16.53■□□□□ 0.24
Trnp1Q80ZI1 Mir1894-201ENSMUST00000122802 81 ntBASIC16.53■□□□□ 0.24
Trnp1Q80ZI1 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Trnp1Q80ZI1 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC16.53■□□□□ 0.24
Trnp1Q80ZI1 Gm17794-201ENSMUST00000220252 955 ntBASIC16.53■□□□□ 0.24
Trnp1Q80ZI1 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trnp1Q80ZI1 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trnp1Q80ZI1 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC16.53■□□□□ 0.24
Trnp1Q80ZI1 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trnp1Q80ZI1 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trnp1Q80ZI1 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trnp1Q80ZI1 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Trnp1Q80ZI1 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trnp1Q80ZI1 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trnp1Q80ZI1 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Trnp1Q80ZI1 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Trnp1Q80ZI1 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Trnp1Q80ZI1 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Trnp1Q80ZI1 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trnp1Q80ZI1 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trnp1Q80ZI1 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trnp1Q80ZI1 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trnp1Q80ZI1 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trnp1Q80ZI1 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Trnp1Q80ZI1 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Trnp1Q80ZI1 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC16.52■□□□□ 0.24
Trnp1Q80ZI1 Gm8835-201ENSMUST00000173096 1169 ntBASIC16.52■□□□□ 0.24
Trnp1Q80ZI1 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trnp1Q80ZI1 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Trnp1Q80ZI1 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC16.52■□□□□ 0.24
Trnp1Q80ZI1 Gm18307-201ENSMUST00000206864 949 ntBASIC16.52■□□□□ 0.24
Trnp1Q80ZI1 Gm7446-201ENSMUST00000221035 1240 ntBASIC16.52■□□□□ 0.24
Trnp1Q80ZI1 AC154806.6-201ENSMUST00000228192 202 ntBASIC16.52■□□□□ 0.24
Trnp1Q80ZI1 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trnp1Q80ZI1 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trnp1Q80ZI1 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trnp1Q80ZI1 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Trnp1Q80ZI1 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trnp1Q80ZI1 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trnp1Q80ZI1 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trnp1Q80ZI1 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
Trnp1Q80ZI1 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.23
Trnp1Q80ZI1 Dancr-204ENSMUST00000132389 2347 ntBASIC16.52■□□□□ 0.23
Trnp1Q80ZI1 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trnp1Q80ZI1 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trnp1Q80ZI1 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
Trnp1Q80ZI1 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trnp1Q80ZI1 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC16.51■□□□□ 0.23
Trnp1Q80ZI1 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Trnp1Q80ZI1 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 54.6 ms