Protein–RNA interactions for Protein: Q80X53

Ccdc116, Coiled-coil domain-containing protein 116, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc116Q80X53 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ccdc116Q80X53 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ccdc116Q80X53 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC14.49□□□□□ -0.09
Ccdc116Q80X53 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Ccdc116Q80X53 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ccdc116Q80X53 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ccdc116Q80X53 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ccdc116Q80X53 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Ccdc116Q80X53 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ccdc116Q80X53 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC14.49□□□□□ -0.09
Ccdc116Q80X53 Gm12008-201ENSMUST00000117791 755 ntBASIC14.49□□□□□ -0.09
Ccdc116Q80X53 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ccdc116Q80X53 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ccdc116Q80X53 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ccdc116Q80X53 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC14.49□□□□□ -0.09
Ccdc116Q80X53 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Ccdc116Q80X53 Gm2651-201ENSMUST00000203560 838 ntBASIC14.49□□□□□ -0.09
Ccdc116Q80X53 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC14.49□□□□□ -0.09
Ccdc116Q80X53 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC14.49□□□□□ -0.09
Ccdc116Q80X53 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Ccdc116Q80X53 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ccdc116Q80X53 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ccdc116Q80X53 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC14.49□□□□□ -0.09
Ccdc116Q80X53 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ccdc116Q80X53 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC14.49□□□□□ -0.09
Ccdc116Q80X53 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Ccdc116Q80X53 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ccdc116Q80X53 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ccdc116Q80X53 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Ccdc116Q80X53 Tcf21-202ENSMUST00000218002 1788 ntBASIC14.49□□□□□ -0.09
Ccdc116Q80X53 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Ccdc116Q80X53 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC14.49□□□□□ -0.09
Ccdc116Q80X53 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC14.49□□□□□ -0.09
Ccdc116Q80X53 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Ccdc116Q80X53 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC14.49□□□□□ -0.09
Ccdc116Q80X53 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Ccdc116Q80X53 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ccdc116Q80X53 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ccdc116Q80X53 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ccdc116Q80X53 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Ccdc116Q80X53 AC122901.1-201ENSMUST00000214203 1790 ntBASIC14.48□□□□□ -0.09
Ccdc116Q80X53 Sorbs3-204ENSMUST00000227929 2460 ntBASIC14.48□□□□□ -0.09
Ccdc116Q80X53 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC14.48□□□□□ -0.09
Ccdc116Q80X53 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ccdc116Q80X53 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC14.48□□□□□ -0.09
Ccdc116Q80X53 Trav13-3-201ENSMUST00000117226 336 ntBASIC14.48□□□□□ -0.09
Ccdc116Q80X53 Gm15593-201ENSMUST00000122085 1008 ntBASIC14.48□□□□□ -0.09
Ccdc116Q80X53 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC14.48□□□□□ -0.09
Ccdc116Q80X53 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Ccdc116Q80X53 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC14.48□□□□□ -0.09
Ccdc116Q80X53 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC14.48□□□□□ -0.09
Ccdc116Q80X53 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ccdc116Q80X53 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ccdc116Q80X53 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ccdc116Q80X53 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Ccdc116Q80X53 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ccdc116Q80X53 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ccdc116Q80X53 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Ccdc116Q80X53 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ccdc116Q80X53 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ccdc116Q80X53 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ccdc116Q80X53 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Ccdc116Q80X53 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Ccdc116Q80X53 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Ccdc116Q80X53 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ccdc116Q80X53 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ccdc116Q80X53 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Ccdc116Q80X53 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ccdc116Q80X53 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ccdc116Q80X53 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
Ccdc116Q80X53 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Ccdc116Q80X53 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC14.47□□□□□ -0.09
Ccdc116Q80X53 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Ccdc116Q80X53 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC14.47□□□□□ -0.09
Ccdc116Q80X53 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Ccdc116Q80X53 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC14.47□□□□□ -0.09
Ccdc116Q80X53 Gm18195-201ENSMUST00000207604 706 ntBASIC14.47□□□□□ -0.09
Ccdc116Q80X53 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC14.47□□□□□ -0.09
Ccdc116Q80X53 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC14.47□□□□□ -0.09
Ccdc116Q80X53 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ccdc116Q80X53 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ccdc116Q80X53 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ccdc116Q80X53 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ccdc116Q80X53 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ccdc116Q80X53 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ccdc116Q80X53 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ccdc116Q80X53 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ccdc116Q80X53 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ccdc116Q80X53 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ccdc116Q80X53 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Ccdc116Q80X53 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ccdc116Q80X53 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ccdc116Q80X53 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC14.47□□□□□ -0.09
Ccdc116Q80X53 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ccdc116Q80X53 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC14.47□□□□□ -0.09
Ccdc116Q80X53 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ccdc116Q80X53 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ccdc116Q80X53 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ccdc116Q80X53 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Ccdc116Q80X53 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms