Protein–RNA interactions for Protein: Q80VM9

Otop1, Otopetrin-1, mousemouse

Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otop1Q80VM9 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Otop1Q80VM9 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Otop1Q80VM9 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Otop1Q80VM9 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Otop1Q80VM9 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC14.22□□□□□ -0.13
Otop1Q80VM9 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Otop1Q80VM9 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Otop1Q80VM9 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Otop1Q80VM9 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Otop1Q80VM9 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
Otop1Q80VM9 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC14.22□□□□□ -0.13
Otop1Q80VM9 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Otop1Q80VM9 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Otop1Q80VM9 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC14.22□□□□□ -0.13
Otop1Q80VM9 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Otop1Q80VM9 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Otop1Q80VM9 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Otop1Q80VM9 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Otop1Q80VM9 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC14.22□□□□□ -0.13
Otop1Q80VM9 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Otop1Q80VM9 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Otop1Q80VM9 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Otop1Q80VM9 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Otop1Q80VM9 Gm8096-201ENSMUST00000209921 1591 ntBASIC14.22□□□□□ -0.13
Otop1Q80VM9 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Otop1Q80VM9 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Otop1Q80VM9 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Otop1Q80VM9 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Otop1Q80VM9 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC14.21□□□□□ -0.13
Otop1Q80VM9 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Otop1Q80VM9 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Otop1Q80VM9 Syt7-204ENSMUST00000223586 1344 ntBASIC14.21□□□□□ -0.13
Otop1Q80VM9 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Otop1Q80VM9 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Otop1Q80VM9 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Otop1Q80VM9 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Otop1Q80VM9 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Otop1Q80VM9 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Otop1Q80VM9 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Otop1Q80VM9 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC14.21□□□□□ -0.13
Otop1Q80VM9 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Otop1Q80VM9 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Otop1Q80VM9 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC14.21□□□□□ -0.13
Otop1Q80VM9 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Otop1Q80VM9 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Otop1Q80VM9 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Otop1Q80VM9 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC14.21□□□□□ -0.13
Otop1Q80VM9 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Otop1Q80VM9 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC14.21□□□□□ -0.13
Otop1Q80VM9 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Otop1Q80VM9 AC132863.2-201ENSMUST00000226643 799 ntBASIC14.21□□□□□ -0.13
Otop1Q80VM9 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Otop1Q80VM9 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Otop1Q80VM9 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Otop1Q80VM9 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Otop1Q80VM9 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
Otop1Q80VM9 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Otop1Q80VM9 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
Otop1Q80VM9 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Otop1Q80VM9 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Otop1Q80VM9 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Otop1Q80VM9 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Otop1Q80VM9 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Otop1Q80VM9 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC14.2□□□□□ -0.14
Otop1Q80VM9 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC14.2□□□□□ -0.14
Otop1Q80VM9 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC14.2□□□□□ -0.14
Otop1Q80VM9 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Otop1Q80VM9 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Otop1Q80VM9 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Otop1Q80VM9 Gm12490-201ENSMUST00000120255 560 ntBASIC14.2□□□□□ -0.14
Otop1Q80VM9 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC14.2□□□□□ -0.14
Otop1Q80VM9 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Otop1Q80VM9 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Otop1Q80VM9 Gm18766-201ENSMUST00000189811 808 ntBASIC14.2□□□□□ -0.14
Otop1Q80VM9 Gm18187-201ENSMUST00000196476 984 ntBASIC14.2□□□□□ -0.14
Otop1Q80VM9 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC14.2□□□□□ -0.14
Otop1Q80VM9 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC14.2□□□□□ -0.14
Otop1Q80VM9 CT010506.4-201ENSMUST00000225457 351 ntBASIC14.2□□□□□ -0.14
Otop1Q80VM9 AC132467.2-202ENSMUST00000227726 559 ntBASIC14.2□□□□□ -0.14
Otop1Q80VM9 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Otop1Q80VM9 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Otop1Q80VM9 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Otop1Q80VM9 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Otop1Q80VM9 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Otop1Q80VM9 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Otop1Q80VM9 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Otop1Q80VM9 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Otop1Q80VM9 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Otop1Q80VM9 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC14.19□□□□□ -0.14
Otop1Q80VM9 Gm38327-201ENSMUST00000195852 1755 ntBASIC14.19□□□□□ -0.14
Otop1Q80VM9 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Otop1Q80VM9 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Otop1Q80VM9 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Otop1Q80VM9 Gm3365-201ENSMUST00000216296 1480 ntBASIC14.19□□□□□ -0.14
Otop1Q80VM9 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Otop1Q80VM9 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC14.19□□□□□ -0.14
Otop1Q80VM9 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Otop1Q80VM9 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
Otop1Q80VM9 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Otop1Q80VM9 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms