Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ubfd1Q78JW9 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC14.4□□□□□ -0.1
Ubfd1Q78JW9 Mir7023-201ENSMUST00000185093 64 ntBASIC14.4□□□□□ -0.1
Ubfd1Q78JW9 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC14.4□□□□□ -0.1
Ubfd1Q78JW9 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ubfd1Q78JW9 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ubfd1Q78JW9 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ubfd1Q78JW9 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Ubfd1Q78JW9 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ubfd1Q78JW9 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ubfd1Q78JW9 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ubfd1Q78JW9 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC14.4□□□□□ -0.1
Ubfd1Q78JW9 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ubfd1Q78JW9 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ubfd1Q78JW9 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ubfd1Q78JW9 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ubfd1Q78JW9 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ubfd1Q78JW9 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ubfd1Q78JW9 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ubfd1Q78JW9 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ubfd1Q78JW9 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ubfd1Q78JW9 Gm21009-201ENSMUST00000197169 1669 ntBASIC14.39□□□□□ -0.11
Ubfd1Q78JW9 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ubfd1Q78JW9 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ubfd1Q78JW9 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ubfd1Q78JW9 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ubfd1Q78JW9 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ubfd1Q78JW9 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ubfd1Q78JW9 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
Ubfd1Q78JW9 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ubfd1Q78JW9 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ubfd1Q78JW9 Gm8749-201ENSMUST00000117737 331 ntBASIC14.39□□□□□ -0.11
Ubfd1Q78JW9 Gm13015-201ENSMUST00000118674 204 ntBASIC14.39□□□□□ -0.11
Ubfd1Q78JW9 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ubfd1Q78JW9 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ubfd1Q78JW9 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ubfd1Q78JW9 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC14.39□□□□□ -0.11
Ubfd1Q78JW9 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ubfd1Q78JW9 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC14.39□□□□□ -0.11
Ubfd1Q78JW9 Gm45098-201ENSMUST00000207179 657 ntBASIC14.39□□□□□ -0.11
Ubfd1Q78JW9 AC126408.1-201ENSMUST00000225184 523 ntBASIC14.39□□□□□ -0.11
Ubfd1Q78JW9 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ubfd1Q78JW9 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ubfd1Q78JW9 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Ubfd1Q78JW9 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC14.39□□□□□ -0.11
Ubfd1Q78JW9 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ubfd1Q78JW9 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ubfd1Q78JW9 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ubfd1Q78JW9 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ubfd1Q78JW9 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC14.39□□□□□ -0.11
Ubfd1Q78JW9 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Ubfd1Q78JW9 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
Ubfd1Q78JW9 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ubfd1Q78JW9 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ubfd1Q78JW9 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC14.39□□□□□ -0.11
Ubfd1Q78JW9 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ubfd1Q78JW9 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ubfd1Q78JW9 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ubfd1Q78JW9 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ubfd1Q78JW9 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ubfd1Q78JW9 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ubfd1Q78JW9 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ubfd1Q78JW9 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ubfd1Q78JW9 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ubfd1Q78JW9 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ubfd1Q78JW9 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ubfd1Q78JW9 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ubfd1Q78JW9 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ubfd1Q78JW9 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
Ubfd1Q78JW9 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ubfd1Q78JW9 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ubfd1Q78JW9 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ubfd1Q78JW9 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ubfd1Q78JW9 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ubfd1Q78JW9 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ubfd1Q78JW9 AC159621.2-201ENSMUST00000223519 1326 ntBASIC14.38□□□□□ -0.11
Ubfd1Q78JW9 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ubfd1Q78JW9 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ubfd1Q78JW9 Gm43352-201ENSMUST00000196419 3065 ntBASIC14.38□□□□□ -0.11
Ubfd1Q78JW9 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Ubfd1Q78JW9 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC14.37□□□□□ -0.11
Ubfd1Q78JW9 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ubfd1Q78JW9 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ubfd1Q78JW9 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ubfd1Q78JW9 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ubfd1Q78JW9 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Ubfd1Q78JW9 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ubfd1Q78JW9 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC14.37□□□□□ -0.11
Ubfd1Q78JW9 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ubfd1Q78JW9 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ubfd1Q78JW9 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ubfd1Q78JW9 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ubfd1Q78JW9 Gm8410-201ENSMUST00000117225 605 ntBASIC14.37□□□□□ -0.11
Ubfd1Q78JW9 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ubfd1Q78JW9 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Ubfd1Q78JW9 Gm29541-201ENSMUST00000191351 678 ntBASIC14.37□□□□□ -0.11
Ubfd1Q78JW9 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ubfd1Q78JW9 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ubfd1Q78JW9 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Ubfd1Q78JW9 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms