Protein–RNA interactions for Protein: Q70E20

Sned1, Sushi, nidogen and EGF-like domain-containing protein 1, mousemouse

Predictions only

Length 1,403 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sned1Q70E20 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sned1Q70E20 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Sned1Q70E20 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sned1Q70E20 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sned1Q70E20 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sned1Q70E20 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC17.55■□□□□ 0.4
Sned1Q70E20 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sned1Q70E20 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Sned1Q70E20 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC17.55■□□□□ 0.4
Sned1Q70E20 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sned1Q70E20 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sned1Q70E20 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sned1Q70E20 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC17.54■□□□□ 0.4
Sned1Q70E20 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Sned1Q70E20 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC17.54■□□□□ 0.4
Sned1Q70E20 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Sned1Q70E20 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sned1Q70E20 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Sned1Q70E20 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sned1Q70E20 Gm19439-201ENSMUST00000198195 2273 ntBASIC17.54■□□□□ 0.4
Sned1Q70E20 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Sned1Q70E20 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Sned1Q70E20 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC17.54■□□□□ 0.4
Sned1Q70E20 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Sned1Q70E20 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Sned1Q70E20 Rn7s1-201ENSMUST00000174924 300 ntBASIC17.54■□□□□ 0.4
Sned1Q70E20 Rn7s2-201ENSMUST00000175032 300 ntBASIC17.54■□□□□ 0.4
Sned1Q70E20 Gm26461-201ENSMUST00000175064 290 ntBASIC17.54■□□□□ 0.4
Sned1Q70E20 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC17.54■□□□□ 0.4
Sned1Q70E20 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sned1Q70E20 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sned1Q70E20 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Sned1Q70E20 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Sned1Q70E20 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sned1Q70E20 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sned1Q70E20 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sned1Q70E20 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sned1Q70E20 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sned1Q70E20 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sned1Q70E20 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sned1Q70E20 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Sned1Q70E20 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sned1Q70E20 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC17.53■□□□□ 0.4
Sned1Q70E20 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Sned1Q70E20 Gm21038-201ENSMUST00000222205 1383 ntBASIC17.53■□□□□ 0.4
Sned1Q70E20 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC17.53■□□□□ 0.4
Sned1Q70E20 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC17.53■□□□□ 0.4
Sned1Q70E20 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC17.53■□□□□ 0.4
Sned1Q70E20 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sned1Q70E20 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sned1Q70E20 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sned1Q70E20 Gm13350-201ENSMUST00000120519 479 ntBASIC17.53■□□□□ 0.4
Sned1Q70E20 Gm16177-201ENSMUST00000120728 718 ntBASIC17.53■□□□□ 0.4
Sned1Q70E20 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Sned1Q70E20 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Sned1Q70E20 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Sned1Q70E20 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Sned1Q70E20 Gm4857-201ENSMUST00000192718 785 ntBASIC17.53■□□□□ 0.4
Sned1Q70E20 Gm43118-201ENSMUST00000199149 775 ntBASIC17.53■□□□□ 0.4
Sned1Q70E20 Gm18934-201ENSMUST00000216671 1044 ntBASIC17.53■□□□□ 0.4
Sned1Q70E20 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sned1Q70E20 Gm24526-201ENSMUST00000082921 158 ntBASIC17.53■□□□□ 0.4
Sned1Q70E20 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sned1Q70E20 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sned1Q70E20 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Sned1Q70E20 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sned1Q70E20 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
Sned1Q70E20 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sned1Q70E20 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sned1Q70E20 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sned1Q70E20 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sned1Q70E20 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC17.53■□□□□ 0.4
Sned1Q70E20 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Sned1Q70E20 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sned1Q70E20 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sned1Q70E20 AC163637.1-201ENSMUST00000215491 1894 ntBASIC17.52■□□□□ 0.4
Sned1Q70E20 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sned1Q70E20 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sned1Q70E20 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
Sned1Q70E20 Gm45930-201ENSMUST00000221330 292 ntBASIC17.52■□□□□ 0.4
Sned1Q70E20 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC17.52■□□□□ 0.4
Sned1Q70E20 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC17.52■□□□□ 0.4
Sned1Q70E20 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Sned1Q70E20 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC17.52■□□□□ 0.39
Sned1Q70E20 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
Sned1Q70E20 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Sned1Q70E20 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Sned1Q70E20 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Sned1Q70E20 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC17.51■□□□□ 0.39
Sned1Q70E20 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sned1Q70E20 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sned1Q70E20 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sned1Q70E20 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC17.51■□□□□ 0.39
Sned1Q70E20 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sned1Q70E20 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sned1Q70E20 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Sned1Q70E20 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Sned1Q70E20 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Sned1Q70E20 Gm19184-201ENSMUST00000196798 928 ntBASIC17.51■□□□□ 0.39
Sned1Q70E20 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms