Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Smarcd3Q6P9Z1 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smarcd3Q6P9Z1 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Smarcd3Q6P9Z1 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smarcd3Q6P9Z1 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Smarcd3Q6P9Z1 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC13.6□□□□□ -0.23
Smarcd3Q6P9Z1 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Smarcd3Q6P9Z1 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Smarcd3Q6P9Z1 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smarcd3Q6P9Z1 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Smarcd3Q6P9Z1 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Smarcd3Q6P9Z1 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Smarcd3Q6P9Z1 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Smarcd3Q6P9Z1 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Smarcd3Q6P9Z1 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Smarcd3Q6P9Z1 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Smarcd3Q6P9Z1 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Smarcd3Q6P9Z1 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Smarcd3Q6P9Z1 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Smarcd3Q6P9Z1 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Smarcd3Q6P9Z1 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
Smarcd3Q6P9Z1 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Smarcd3Q6P9Z1 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Smarcd3Q6P9Z1 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Smarcd3Q6P9Z1 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Smarcd3Q6P9Z1 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC13.59□□□□□ -0.23
Smarcd3Q6P9Z1 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC13.59□□□□□ -0.23
Smarcd3Q6P9Z1 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Smarcd3Q6P9Z1 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Smarcd3Q6P9Z1 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Smarcd3Q6P9Z1 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Smarcd3Q6P9Z1 Mxra8os-201ENSMUST00000097740 687 ntBASIC13.59□□□□□ -0.23
Smarcd3Q6P9Z1 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Smarcd3Q6P9Z1 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC13.59□□□□□ -0.23
Smarcd3Q6P9Z1 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Smarcd3Q6P9Z1 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Smarcd3Q6P9Z1 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Smarcd3Q6P9Z1 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Smarcd3Q6P9Z1 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Smarcd3Q6P9Z1 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Smarcd3Q6P9Z1 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Smarcd3Q6P9Z1 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Smarcd3Q6P9Z1 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Smarcd3Q6P9Z1 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC13.58□□□□□ -0.23
Smarcd3Q6P9Z1 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Smarcd3Q6P9Z1 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Smarcd3Q6P9Z1 AC167013.2-201ENSMUST00000228520 2684 ntBASIC13.58□□□□□ -0.23
Smarcd3Q6P9Z1 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Smarcd3Q6P9Z1 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Smarcd3Q6P9Z1 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Smarcd3Q6P9Z1 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Smarcd3Q6P9Z1 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC13.58□□□□□ -0.23
Smarcd3Q6P9Z1 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Smarcd3Q6P9Z1 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Smarcd3Q6P9Z1 Carlr-201ENSMUST00000181515 2574 ntBASIC13.58□□□□□ -0.24
Smarcd3Q6P9Z1 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Smarcd3Q6P9Z1 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Smarcd3Q6P9Z1 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Smarcd3Q6P9Z1 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Smarcd3Q6P9Z1 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Smarcd3Q6P9Z1 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Smarcd3Q6P9Z1 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Smarcd3Q6P9Z1 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Smarcd3Q6P9Z1 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Smarcd3Q6P9Z1 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC13.58□□□□□ -0.24
Smarcd3Q6P9Z1 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Smarcd3Q6P9Z1 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC13.58□□□□□ -0.24
Smarcd3Q6P9Z1 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC13.58□□□□□ -0.24
Smarcd3Q6P9Z1 Gm43767-201ENSMUST00000198933 381 ntBASIC13.58□□□□□ -0.24
Smarcd3Q6P9Z1 Gm10313-201ENSMUST00000095320 1002 ntBASIC13.58□□□□□ -0.24
Smarcd3Q6P9Z1 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC13.58□□□□□ -0.24
Smarcd3Q6P9Z1 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Smarcd3Q6P9Z1 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC13.58□□□□□ -0.24
Smarcd3Q6P9Z1 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Smarcd3Q6P9Z1 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Smarcd3Q6P9Z1 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Smarcd3Q6P9Z1 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Smarcd3Q6P9Z1 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC13.58□□□□□ -0.24
Smarcd3Q6P9Z1 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Smarcd3Q6P9Z1 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Smarcd3Q6P9Z1 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Smarcd3Q6P9Z1 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Smarcd3Q6P9Z1 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Smarcd3Q6P9Z1 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Smarcd3Q6P9Z1 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Smarcd3Q6P9Z1 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Smarcd3Q6P9Z1 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Smarcd3Q6P9Z1 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC13.57□□□□□ -0.24
Smarcd3Q6P9Z1 Gm11185-201ENSMUST00000117732 1007 ntBASIC13.57□□□□□ -0.24
Smarcd3Q6P9Z1 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Smarcd3Q6P9Z1 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC13.57□□□□□ -0.24
Smarcd3Q6P9Z1 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC13.57□□□□□ -0.24
Smarcd3Q6P9Z1 Gm2308-201ENSMUST00000166539 1004 ntBASIC13.57□□□□□ -0.24
Smarcd3Q6P9Z1 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC13.57□□□□□ -0.24
Smarcd3Q6P9Z1 AC154757.1-201ENSMUST00000228289 336 ntBASIC13.57□□□□□ -0.24
Smarcd3Q6P9Z1 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Smarcd3Q6P9Z1 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC13.57□□□□□ -0.24
Smarcd3Q6P9Z1 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC13.57□□□□□ -0.24
Smarcd3Q6P9Z1 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Smarcd3Q6P9Z1 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC13.57□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms