Protein–RNA interactions for Protein: Q6NVF9

Cpsf6, Cleavage and polyadenylation specificity factor subunit 6, mousemouse

Known RBP Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf6Q6NVF9 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Cpsf6Q6NVF9 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cpsf6Q6NVF9 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cpsf6Q6NVF9 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cpsf6Q6NVF9 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cpsf6Q6NVF9 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cpsf6Q6NVF9 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cpsf6Q6NVF9 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cpsf6Q6NVF9 AC025913.2-201ENSMUST00000220136 1766 ntBASIC14.34□□□□□ -0.11
Cpsf6Q6NVF9 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Cpsf6Q6NVF9 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cpsf6Q6NVF9 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cpsf6Q6NVF9 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cpsf6Q6NVF9 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cpsf6Q6NVF9 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cpsf6Q6NVF9 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cpsf6Q6NVF9 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Cpsf6Q6NVF9 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cpsf6Q6NVF9 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cpsf6Q6NVF9 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cpsf6Q6NVF9 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Cpsf6Q6NVF9 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cpsf6Q6NVF9 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cpsf6Q6NVF9 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Cpsf6Q6NVF9 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cpsf6Q6NVF9 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cpsf6Q6NVF9 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Cpsf6Q6NVF9 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cpsf6Q6NVF9 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Cpsf6Q6NVF9 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC14.34□□□□□ -0.11
Cpsf6Q6NVF9 Gm9449-201ENSMUST00000207265 1011 ntBASIC14.34□□□□□ -0.11
Cpsf6Q6NVF9 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cpsf6Q6NVF9 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cpsf6Q6NVF9 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cpsf6Q6NVF9 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cpsf6Q6NVF9 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cpsf6Q6NVF9 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cpsf6Q6NVF9 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cpsf6Q6NVF9 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC14.34□□□□□ -0.11
Cpsf6Q6NVF9 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Cpsf6Q6NVF9 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Cpsf6Q6NVF9 Gm13294-201ENSMUST00000121757 1330 ntBASIC14.34□□□□□ -0.11
Cpsf6Q6NVF9 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cpsf6Q6NVF9 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cpsf6Q6NVF9 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cpsf6Q6NVF9 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Cpsf6Q6NVF9 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cpsf6Q6NVF9 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cpsf6Q6NVF9 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Cpsf6Q6NVF9 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Cpsf6Q6NVF9 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Cpsf6Q6NVF9 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Cpsf6Q6NVF9 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC14.33□□□□□ -0.11
Cpsf6Q6NVF9 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Cpsf6Q6NVF9 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Cpsf6Q6NVF9 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cpsf6Q6NVF9 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cpsf6Q6NVF9 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cpsf6Q6NVF9 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Cpsf6Q6NVF9 Gm27300-201ENSMUST00000184085 97 ntBASIC14.33□□□□□ -0.12
Cpsf6Q6NVF9 Gm27335-201ENSMUST00000184758 97 ntBASIC14.33□□□□□ -0.12
Cpsf6Q6NVF9 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC14.33□□□□□ -0.12
Cpsf6Q6NVF9 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cpsf6Q6NVF9 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cpsf6Q6NVF9 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cpsf6Q6NVF9 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC14.33□□□□□ -0.12
Cpsf6Q6NVF9 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cpsf6Q6NVF9 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cpsf6Q6NVF9 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cpsf6Q6NVF9 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cpsf6Q6NVF9 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cpsf6Q6NVF9 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Cpsf6Q6NVF9 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Cpsf6Q6NVF9 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cpsf6Q6NVF9 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC14.32□□□□□ -0.12
Cpsf6Q6NVF9 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cpsf6Q6NVF9 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cpsf6Q6NVF9 Fbxl12-205ENSMUST00000140702 1555 ntBASIC14.32□□□□□ -0.12
Cpsf6Q6NVF9 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cpsf6Q6NVF9 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC14.32□□□□□ -0.12
Cpsf6Q6NVF9 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC14.32□□□□□ -0.12
Cpsf6Q6NVF9 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Cpsf6Q6NVF9 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Cpsf6Q6NVF9 Gm2651-201ENSMUST00000203560 838 ntBASIC14.32□□□□□ -0.12
Cpsf6Q6NVF9 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cpsf6Q6NVF9 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cpsf6Q6NVF9 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cpsf6Q6NVF9 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Cpsf6Q6NVF9 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cpsf6Q6NVF9 AC154527.4-201ENSMUST00000224364 1667 ntBASIC14.32□□□□□ -0.12
Cpsf6Q6NVF9 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC14.32□□□□□ -0.12
Cpsf6Q6NVF9 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cpsf6Q6NVF9 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cpsf6Q6NVF9 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cpsf6Q6NVF9 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC14.32□□□□□ -0.12
Cpsf6Q6NVF9 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cpsf6Q6NVF9 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cpsf6Q6NVF9 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Cpsf6Q6NVF9 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Cpsf6Q6NVF9 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms