Protein–RNA interactions for Protein: Q64727

Vcl, Vinculin, mousemouse

Known RBP Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VclQ64727 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC14.54□□□□□ -0.08
VclQ64727 Rpph1-201ENSMUST00000175096 319 ntBASIC14.54□□□□□ -0.08
VclQ64727 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
VclQ64727 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
VclQ64727 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
VclQ64727 AC164567.1-201ENSMUST00000219185 960 ntBASIC14.54□□□□□ -0.08
VclQ64727 CT025555.1-201ENSMUST00000225901 1217 ntBASIC14.54□□□□□ -0.08
VclQ64727 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
VclQ64727 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
VclQ64727 Gpr146-202ENSMUST00000053120 1040 ntBASIC14.54□□□□□ -0.08
VclQ64727 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
VclQ64727 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
VclQ64727 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
VclQ64727 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC14.54□□□□□ -0.08
VclQ64727 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
VclQ64727 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC14.54□□□□□ -0.08
VclQ64727 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
VclQ64727 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
VclQ64727 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
VclQ64727 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
VclQ64727 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
VclQ64727 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
VclQ64727 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
VclQ64727 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
VclQ64727 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
VclQ64727 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
VclQ64727 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
VclQ64727 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
VclQ64727 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
VclQ64727 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
VclQ64727 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
VclQ64727 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
VclQ64727 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
VclQ64727 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
VclQ64727 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
VclQ64727 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
VclQ64727 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
VclQ64727 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
VclQ64727 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
VclQ64727 Gm26308-201ENSMUST00000157768 69 ntBASIC14.53□□□□□ -0.08
VclQ64727 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC14.53□□□□□ -0.08
VclQ64727 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
VclQ64727 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC14.53□□□□□ -0.08
VclQ64727 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
VclQ64727 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
VclQ64727 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
VclQ64727 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
VclQ64727 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
VclQ64727 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
VclQ64727 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
VclQ64727 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
VclQ64727 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
VclQ64727 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
VclQ64727 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
VclQ64727 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
VclQ64727 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
VclQ64727 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
VclQ64727 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
VclQ64727 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
VclQ64727 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
VclQ64727 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
VclQ64727 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
VclQ64727 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
VclQ64727 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC14.52□□□□□ -0.08
VclQ64727 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
VclQ64727 AC131743.5-201ENSMUST00000220775 1618 ntBASIC14.52□□□□□ -0.08
VclQ64727 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
VclQ64727 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
VclQ64727 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
VclQ64727 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC14.52□□□□□ -0.08
VclQ64727 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
VclQ64727 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
VclQ64727 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
VclQ64727 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
VclQ64727 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
VclQ64727 Gm12017-201ENSMUST00000122453 1003 ntBASIC14.52□□□□□ -0.09
VclQ64727 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
VclQ64727 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC14.52□□□□□ -0.09
VclQ64727 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
VclQ64727 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC14.52□□□□□ -0.09
VclQ64727 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
VclQ64727 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
VclQ64727 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
VclQ64727 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
VclQ64727 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.09
VclQ64727 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
VclQ64727 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
VclQ64727 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
VclQ64727 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
VclQ64727 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
VclQ64727 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
VclQ64727 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
VclQ64727 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
VclQ64727 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
VclQ64727 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
VclQ64727 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
VclQ64727 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
VclQ64727 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
VclQ64727 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
VclQ64727 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms