Protein–RNA interactions for Protein: Q63870

Col7a1, Collagen alpha-1(VII) chain, mousemouse

Predictions only

Length 2,944 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col7a1Q63870 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC11.97□□□□□ -0.49
Col7a1Q63870 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC11.97□□□□□ -0.49
Col7a1Q63870 Gm26927-201ENSMUST00000182385 965 ntBASIC11.97□□□□□ -0.49
Col7a1Q63870 Gm27320-201ENSMUST00000184892 109 ntBASIC11.97□□□□□ -0.49
Col7a1Q63870 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC11.97□□□□□ -0.49
Col7a1Q63870 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC11.97□□□□□ -0.49
Col7a1Q63870 Ighv1-25-201ENSMUST00000195638 345 ntBASIC11.97□□□□□ -0.49
Col7a1Q63870 Snhg8-201ENSMUST00000196466 448 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Col7a1Q63870 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC11.97□□□□□ -0.49
Col7a1Q63870 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Col7a1Q63870 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC11.97□□□□□ -0.49
Col7a1Q63870 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Col7a1Q63870 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Col7a1Q63870 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Col7a1Q63870 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC11.97□□□□□ -0.49
Col7a1Q63870 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Col7a1Q63870 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC11.97□□□□□ -0.49
Col7a1Q63870 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
Col7a1Q63870 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC11.97□□□□□ -0.49
Col7a1Q63870 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC11.97□□□□□ -0.49
Col7a1Q63870 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Col7a1Q63870 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Col7a1Q63870 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Col7a1Q63870 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC11.97□□□□□ -0.49
Col7a1Q63870 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Col7a1Q63870 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Col7a1Q63870 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC11.97□□□□□ -0.49
Col7a1Q63870 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC11.97□□□□□ -0.49
Col7a1Q63870 Gm2991-201ENSMUST00000173338 480 ntBASIC11.97□□□□□ -0.49
Col7a1Q63870 Gm4271-201ENSMUST00000174444 973 ntBASIC11.97□□□□□ -0.49
Col7a1Q63870 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC11.97□□□□□ -0.49
Col7a1Q63870 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC11.97□□□□□ -0.49
Col7a1Q63870 Gm9124-201ENSMUST00000191789 1092 ntBASIC11.97□□□□□ -0.49
Col7a1Q63870 Gm9113-201ENSMUST00000192510 1018 ntBASIC11.97□□□□□ -0.49
Col7a1Q63870 Gm9131-201ENSMUST00000193557 1089 ntBASIC11.97□□□□□ -0.49
Col7a1Q63870 Gm9121-201ENSMUST00000193749 1071 ntBASIC11.97□□□□□ -0.49
Col7a1Q63870 Gm18473-201ENSMUST00000220543 868 ntBASIC11.97□□□□□ -0.49
Col7a1Q63870 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Col7a1Q63870 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Col7a1Q63870 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Col7a1Q63870 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Col7a1Q63870 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Col7a1Q63870 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Col7a1Q63870 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Col7a1Q63870 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Col7a1Q63870 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Col7a1Q63870 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC11.96□□□□□ -0.49
Col7a1Q63870 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Col7a1Q63870 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC11.96□□□□□ -0.49
Col7a1Q63870 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Col7a1Q63870 Gm5112-201ENSMUST00000204407 2368 ntBASIC11.96□□□□□ -0.49
Col7a1Q63870 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Col7a1Q63870 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Col7a1Q63870 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Col7a1Q63870 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Col7a1Q63870 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Col7a1Q63870 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Col7a1Q63870 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Col7a1Q63870 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
Col7a1Q63870 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Col7a1Q63870 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC11.96□□□□□ -0.5
Col7a1Q63870 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC11.96□□□□□ -0.5
Col7a1Q63870 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
Col7a1Q63870 AC122371.3-201ENSMUST00000223402 1061 ntBASIC11.96□□□□□ -0.5
Col7a1Q63870 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Col7a1Q63870 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Col7a1Q63870 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
Col7a1Q63870 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Col7a1Q63870 Gm45760-201ENSMUST00000212190 1782 ntBASIC11.95□□□□□ -0.5
Col7a1Q63870 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Col7a1Q63870 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Col7a1Q63870 Gm14017-201ENSMUST00000121934 386 ntBASIC11.95□□□□□ -0.5
Col7a1Q63870 Gm7029-201ENSMUST00000173226 450 ntBASIC11.95□□□□□ -0.5
Col7a1Q63870 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Col7a1Q63870 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC11.95□□□□□ -0.5
Col7a1Q63870 Mrps34-201ENSMUST00000043907 918 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Col7a1Q63870 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Col7a1Q63870 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Col7a1Q63870 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Col7a1Q63870 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Col7a1Q63870 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC11.95□□□□□ -0.5
Col7a1Q63870 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC11.95□□□□□ -0.5
Col7a1Q63870 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Col7a1Q63870 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Col7a1Q63870 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Col7a1Q63870 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Col7a1Q63870 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Col7a1Q63870 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Col7a1Q63870 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Col7a1Q63870 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Col7a1Q63870 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC11.95□□□□□ -0.5
Col7a1Q63870 Gm12201-201ENSMUST00000120657 1234 ntBASIC11.95□□□□□ -0.5
Col7a1Q63870 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC11.95□□□□□ -0.5
Col7a1Q63870 Gm25668-201ENSMUST00000157700 129 ntBASIC11.95□□□□□ -0.5
Col7a1Q63870 Gm18905-201ENSMUST00000205454 928 ntBASIC11.95□□□□□ -0.5
Col7a1Q63870 Zfp36l1-203ENSMUST00000218835 292 ntTSL 3 BASIC11.95□□□□□ -0.5
Col7a1Q63870 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Col7a1Q63870 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Col7a1Q63870 Gm7292-201ENSMUST00000194706 2527 ntBASIC11.95□□□□□ -0.5
Col7a1Q63870 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms