Protein–RNA interactions for Protein: Q60641

Nr1h4, Bile acid receptor, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h4Q60641 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Nr1h4Q60641 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Nr1h4Q60641 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nr1h4Q60641 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nr1h4Q60641 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nr1h4Q60641 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nr1h4Q60641 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Nr1h4Q60641 Gm43399-201ENSMUST00000202546 2374 ntBASIC14.1□□□□□ -0.15
Nr1h4Q60641 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Nr1h4Q60641 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Nr1h4Q60641 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nr1h4Q60641 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nr1h4Q60641 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nr1h4Q60641 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nr1h4Q60641 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nr1h4Q60641 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nr1h4Q60641 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nr1h4Q60641 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nr1h4Q60641 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
Nr1h4Q60641 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nr1h4Q60641 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Nr1h4Q60641 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nr1h4Q60641 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nr1h4Q60641 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nr1h4Q60641 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC14.09□□□□□ -0.15
Nr1h4Q60641 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Nr1h4Q60641 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nr1h4Q60641 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nr1h4Q60641 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nr1h4Q60641 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Nr1h4Q60641 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC14.09□□□□□ -0.15
Nr1h4Q60641 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
Nr1h4Q60641 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nr1h4Q60641 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Nr1h4Q60641 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC14.09□□□□□ -0.15
Nr1h4Q60641 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC14.09□□□□□ -0.15
Nr1h4Q60641 AC154471.1-201ENSMUST00000224418 436 ntBASIC14.09□□□□□ -0.15
Nr1h4Q60641 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nr1h4Q60641 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nr1h4Q60641 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nr1h4Q60641 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nr1h4Q60641 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Nr1h4Q60641 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nr1h4Q60641 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nr1h4Q60641 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nr1h4Q60641 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nr1h4Q60641 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nr1h4Q60641 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Nr1h4Q60641 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nr1h4Q60641 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nr1h4Q60641 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Nr1h4Q60641 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Nr1h4Q60641 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Nr1h4Q60641 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Nr1h4Q60641 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Nr1h4Q60641 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Nr1h4Q60641 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Nr1h4Q60641 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Nr1h4Q60641 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nr1h4Q60641 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nr1h4Q60641 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nr1h4Q60641 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nr1h4Q60641 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nr1h4Q60641 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nr1h4Q60641 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nr1h4Q60641 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nr1h4Q60641 Gm42632-201ENSMUST00000201707 2411 ntBASIC14.08□□□□□ -0.16
Nr1h4Q60641 Gm7935-201ENSMUST00000100555 1278 ntBASIC14.08□□□□□ -0.16
Nr1h4Q60641 Gm12644-201ENSMUST00000119935 606 ntBASIC14.08□□□□□ -0.16
Nr1h4Q60641 Gm27646-201ENSMUST00000183989 110 ntBASIC14.08□□□□□ -0.16
Nr1h4Q60641 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC14.08□□□□□ -0.16
Nr1h4Q60641 Gm6296-201ENSMUST00000222599 943 ntBASIC14.08□□□□□ -0.16
Nr1h4Q60641 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Nr1h4Q60641 Cmtm5-203ENSMUST00000227441 610 ntBASIC14.08□□□□□ -0.16
Nr1h4Q60641 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
Nr1h4Q60641 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Nr1h4Q60641 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nr1h4Q60641 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nr1h4Q60641 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
Nr1h4Q60641 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Nr1h4Q60641 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Nr1h4Q60641 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Nr1h4Q60641 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nr1h4Q60641 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nr1h4Q60641 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Nr1h4Q60641 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nr1h4Q60641 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nr1h4Q60641 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nr1h4Q60641 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nr1h4Q60641 Carlr-201ENSMUST00000181515 2574 ntBASIC14.08□□□□□ -0.16
Nr1h4Q60641 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Nr1h4Q60641 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nr1h4Q60641 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nr1h4Q60641 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nr1h4Q60641 Gm44645-201ENSMUST00000205492 1653 ntBASIC14.07□□□□□ -0.16
Nr1h4Q60641 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Nr1h4Q60641 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nr1h4Q60641 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nr1h4Q60641 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nr1h4Q60641 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 51.1 ms