Protein–RNA interactions for Protein: Q5U4C3

Scaf1, Splicing factor, arginine/serine-rich 19, mousemouse

Known RBP Predictions only

Length 1,256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf1Q5U4C3 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Scaf1Q5U4C3 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Scaf1Q5U4C3 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Scaf1Q5U4C3 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC19.19■□□□□ 0.66
Scaf1Q5U4C3 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Scaf1Q5U4C3 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Scaf1Q5U4C3 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Scaf1Q5U4C3 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Scaf1Q5U4C3 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Scaf1Q5U4C3 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Scaf1Q5U4C3 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Scaf1Q5U4C3 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC19.19■□□□□ 0.66
Scaf1Q5U4C3 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Scaf1Q5U4C3 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Scaf1Q5U4C3 Gm15393-201ENSMUST00000120499 219 ntBASIC19.19■□□□□ 0.66
Scaf1Q5U4C3 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Scaf1Q5U4C3 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Scaf1Q5U4C3 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC19.19■□□□□ 0.66
Scaf1Q5U4C3 Gm6916-202ENSMUST00000205523 195 ntBASIC19.19■□□□□ 0.66
Scaf1Q5U4C3 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Scaf1Q5U4C3 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Scaf1Q5U4C3 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC19.19■□□□□ 0.66
Scaf1Q5U4C3 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Scaf1Q5U4C3 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC19.19■□□□□ 0.66
Scaf1Q5U4C3 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Scaf1Q5U4C3 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Scaf1Q5U4C3 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Scaf1Q5U4C3 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Scaf1Q5U4C3 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC19.19■□□□□ 0.66
Scaf1Q5U4C3 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC19.19■□□□□ 0.66
Scaf1Q5U4C3 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC19.18■□□□□ 0.66
Scaf1Q5U4C3 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Scaf1Q5U4C3 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Scaf1Q5U4C3 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Scaf1Q5U4C3 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Scaf1Q5U4C3 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Scaf1Q5U4C3 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
Scaf1Q5U4C3 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Scaf1Q5U4C3 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Scaf1Q5U4C3 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Scaf1Q5U4C3 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC19.18■□□□□ 0.66
Scaf1Q5U4C3 Gm15460-201ENSMUST00000118147 391 ntBASIC19.18■□□□□ 0.66
Scaf1Q5U4C3 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC19.18■□□□□ 0.66
Scaf1Q5U4C3 Gm4804-201ENSMUST00000182234 999 ntBASIC19.18■□□□□ 0.66
Scaf1Q5U4C3 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Scaf1Q5U4C3 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Scaf1Q5U4C3 Gm19220-201ENSMUST00000222682 803 ntBASIC19.18■□□□□ 0.66
Scaf1Q5U4C3 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC19.18■□□□□ 0.66
Scaf1Q5U4C3 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Scaf1Q5U4C3 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Scaf1Q5U4C3 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Scaf1Q5U4C3 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Scaf1Q5U4C3 Gm20628-201ENSMUST00000177363 3215 ntBASIC19.17■□□□□ 0.66
Scaf1Q5U4C3 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Scaf1Q5U4C3 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Scaf1Q5U4C3 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
Scaf1Q5U4C3 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Scaf1Q5U4C3 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Scaf1Q5U4C3 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC19.17■□□□□ 0.66
Scaf1Q5U4C3 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC19.17■□□□□ 0.66
Scaf1Q5U4C3 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC19.17■□□□□ 0.66
Scaf1Q5U4C3 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC19.17■□□□□ 0.66
Scaf1Q5U4C3 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC19.17■□□□□ 0.66
Scaf1Q5U4C3 Ighv1-25-201ENSMUST00000195638 345 ntBASIC19.17■□□□□ 0.66
Scaf1Q5U4C3 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Scaf1Q5U4C3 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC19.17■□□□□ 0.66
Scaf1Q5U4C3 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC19.17■□□□□ 0.66
Scaf1Q5U4C3 Gm9797-201ENSMUST00000052902 613 ntBASIC19.17■□□□□ 0.66
Scaf1Q5U4C3 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Scaf1Q5U4C3 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Scaf1Q5U4C3 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Scaf1Q5U4C3 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Scaf1Q5U4C3 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC19.17■□□□□ 0.66
Scaf1Q5U4C3 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Scaf1Q5U4C3 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Scaf1Q5U4C3 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC19.17■□□□□ 0.66
Scaf1Q5U4C3 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Scaf1Q5U4C3 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Scaf1Q5U4C3 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
Scaf1Q5U4C3 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Scaf1Q5U4C3 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Scaf1Q5U4C3 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Scaf1Q5U4C3 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Scaf1Q5U4C3 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Scaf1Q5U4C3 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Scaf1Q5U4C3 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Scaf1Q5U4C3 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Scaf1Q5U4C3 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Scaf1Q5U4C3 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Scaf1Q5U4C3 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Scaf1Q5U4C3 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Scaf1Q5U4C3 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC19.16■□□□□ 0.66
Scaf1Q5U4C3 Gm10766-202ENSMUST00000194123 606 ntBASIC19.16■□□□□ 0.66
Scaf1Q5U4C3 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC19.16■□□□□ 0.66
Scaf1Q5U4C3 Gm45546-201ENSMUST00000211053 2394 ntBASIC19.16■□□□□ 0.66
Scaf1Q5U4C3 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Scaf1Q5U4C3 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Scaf1Q5U4C3 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Scaf1Q5U4C3 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Scaf1Q5U4C3 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms