Protein–RNA interactions for Protein: Q5SNZ0

Ccdc88a, Girdin, mousemouse

Predictions only

Length 1,873 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88aQ5SNZ0 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ccdc88aQ5SNZ0 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ccdc88aQ5SNZ0 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ccdc88aQ5SNZ0 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC16.87■□□□□ 0.29
Ccdc88aQ5SNZ0 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
Ccdc88aQ5SNZ0 Gm9719-201ENSMUST00000162765 543 ntBASIC16.87■□□□□ 0.29
Ccdc88aQ5SNZ0 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Ccdc88aQ5SNZ0 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ccdc88aQ5SNZ0 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Ccdc88aQ5SNZ0 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ccdc88aQ5SNZ0 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC16.87■□□□□ 0.29
Ccdc88aQ5SNZ0 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ccdc88aQ5SNZ0 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Ccdc88aQ5SNZ0 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC16.87■□□□□ 0.29
Ccdc88aQ5SNZ0 Gm37728-201ENSMUST00000195025 2292 ntBASIC16.87■□□□□ 0.29
Ccdc88aQ5SNZ0 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Ccdc88aQ5SNZ0 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Ccdc88aQ5SNZ0 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ccdc88aQ5SNZ0 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ccdc88aQ5SNZ0 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ccdc88aQ5SNZ0 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC16.86■□□□□ 0.29
Ccdc88aQ5SNZ0 Gm27838-201ENSMUST00000184829 128 ntBASIC16.86■□□□□ 0.29
Ccdc88aQ5SNZ0 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Ccdc88aQ5SNZ0 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ccdc88aQ5SNZ0 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Ccdc88aQ5SNZ0 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ccdc88aQ5SNZ0 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ccdc88aQ5SNZ0 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ccdc88aQ5SNZ0 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Ccdc88aQ5SNZ0 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ccdc88aQ5SNZ0 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ccdc88aQ5SNZ0 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ccdc88aQ5SNZ0 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ccdc88aQ5SNZ0 Gm6756-201ENSMUST00000180647 1620 ntBASIC16.86■□□□□ 0.29
Ccdc88aQ5SNZ0 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC16.86■□□□□ 0.29
Ccdc88aQ5SNZ0 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Ccdc88aQ5SNZ0 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC16.86■□□□□ 0.29
Ccdc88aQ5SNZ0 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ccdc88aQ5SNZ0 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ccdc88aQ5SNZ0 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Ccdc88aQ5SNZ0 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC16.86■□□□□ 0.29
Ccdc88aQ5SNZ0 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Ccdc88aQ5SNZ0 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC16.86■□□□□ 0.29
Ccdc88aQ5SNZ0 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ccdc88aQ5SNZ0 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ccdc88aQ5SNZ0 Gm37230-201ENSMUST00000194491 818 ntBASIC16.86■□□□□ 0.29
Ccdc88aQ5SNZ0 Gm6745-201ENSMUST00000199216 526 ntBASIC16.86■□□□□ 0.29
Ccdc88aQ5SNZ0 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Ccdc88aQ5SNZ0 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ccdc88aQ5SNZ0 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ccdc88aQ5SNZ0 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ccdc88aQ5SNZ0 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Ccdc88aQ5SNZ0 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ccdc88aQ5SNZ0 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ccdc88aQ5SNZ0 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ccdc88aQ5SNZ0 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ccdc88aQ5SNZ0 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ccdc88aQ5SNZ0 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Ccdc88aQ5SNZ0 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ccdc88aQ5SNZ0 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ccdc88aQ5SNZ0 Gm10461-201ENSMUST00000202073 4786 ntBASIC16.85■□□□□ 0.29
Ccdc88aQ5SNZ0 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC16.85■□□□□ 0.29
Ccdc88aQ5SNZ0 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ccdc88aQ5SNZ0 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC16.85■□□□□ 0.29
Ccdc88aQ5SNZ0 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ccdc88aQ5SNZ0 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ccdc88aQ5SNZ0 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ccdc88aQ5SNZ0 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Ccdc88aQ5SNZ0 Gm12091-201ENSMUST00000146791 830 ntBASIC16.85■□□□□ 0.29
Ccdc88aQ5SNZ0 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC16.85■□□□□ 0.29
Ccdc88aQ5SNZ0 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Ccdc88aQ5SNZ0 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Ccdc88aQ5SNZ0 Gm45098-201ENSMUST00000207179 657 ntBASIC16.85■□□□□ 0.29
Ccdc88aQ5SNZ0 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC16.85■□□□□ 0.29
Ccdc88aQ5SNZ0 Dupd1-202ENSMUST00000224735 548 ntBASIC16.85■□□□□ 0.29
Ccdc88aQ5SNZ0 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC16.85■□□□□ 0.29
Ccdc88aQ5SNZ0 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ccdc88aQ5SNZ0 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ccdc88aQ5SNZ0 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ccdc88aQ5SNZ0 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ccdc88aQ5SNZ0 Gm6263-201ENSMUST00000120029 1342 ntBASIC16.85■□□□□ 0.29
Ccdc88aQ5SNZ0 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ccdc88aQ5SNZ0 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC16.85■□□□□ 0.29
Ccdc88aQ5SNZ0 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ccdc88aQ5SNZ0 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ccdc88aQ5SNZ0 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ccdc88aQ5SNZ0 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ccdc88aQ5SNZ0 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ccdc88aQ5SNZ0 Gm4204-201ENSMUST00000110798 1231 ntBASIC16.84■□□□□ 0.29
Ccdc88aQ5SNZ0 Gm9726-201ENSMUST00000180321 678 ntBASIC16.84■□□□□ 0.29
Ccdc88aQ5SNZ0 Olfr286-202ENSMUST00000205305 969 ntBASIC16.84■□□□□ 0.29
Ccdc88aQ5SNZ0 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ccdc88aQ5SNZ0 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Ccdc88aQ5SNZ0 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ccdc88aQ5SNZ0 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ccdc88aQ5SNZ0 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Ccdc88aQ5SNZ0 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Ccdc88aQ5SNZ0 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Ccdc88aQ5SNZ0 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Ccdc88aQ5SNZ0 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms